| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0554 |
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| Symbol | |
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| ID | 3706747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 597587 |
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| End bp | 600298 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637737063 |
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| Product | DNA polymerase A |
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| Protein accession | YP_342604 |
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| Protein GI | 77164079 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.266566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGG CGGAAAACCC GGTGCTTATT CTAATCGACG GCTCCTCCTA TCTCTTTCGT
GCTTTCCATG CACTGCCTTC TTTAACGACT TCTAAAGGTC AACCTACCGG GGCAATCTAT
GGGGTCATCA ATATGCTGCG CAAGTTACTT GATGAGTATC AGCCCCAATA CATAGCGGTA
GTTTTTGATG CCAAGGGCAA AACATTTCGC CATGAACTCT TTGAGCAGTA CAAAGACCAT
CGCCCTCCTA TGCCAGAGGA ACTTGCCTGT CAGATTCAGC CCCTCCACGA TCTCATCCGA
GCCCTTGGCT TGCCGCTGCT CTGTGTTAAA GGGGTTGAGG CTGACGATGT CATCGGCACC
TTGGCCCGGC AAGCAACCGC GCAACGGCTG GAGACCCTCA TTTCTAGCGG CGATAAGGAC
TTAGCCCAGC TAGTCAATCC CCATGTGAGC CTGGTCAACA CCATGAATCT ATCTAAATTG
GACCCCGCTG GCGTAAAGGC CAAATTCAAT GTTTCCCCGG AACAAATAGT CGATTACCTA
GCACTGGTGG GCGATACGGT AGACAATATC CCCGGTATCC CTGGCATAGG TCCCAAAACA
GCCGCCAAAC TGCTCTGCCA ATACCACAGC CTGGATCAAA TCATGGCTTA TGCCTCTGAA
ATTAAAGGCA AGATGGGGGA AAGTCTACGA TCCCATCTCA CACAACTTCC CTTGGCAAAG
GAATTGGCCA CCGTTCGCCA GGATCTGCTC CTAGATTTAG GCCCCAAAGA CTTGCGGTGC
GCGCCACCCA ATATTCCCGC CCTGCGTGAA TTGTACGCCG CCCTGGAATT CAAAAGCTGG
CTCCGTGAAC TCTTGGACAA TGAGAACGCC CACTCCTCAA TTTCTAATTC CTCAACGAAC
TCTGCTCCCG CCTATGAGAC CGTGTTTTCC GAGGAAAGCT TTGAGAATTG GGTTGCCCGC
CTGGAAAAGG CTGAATTATT TGCCTTCGAT CTGGAAACCA ATAACTTGGA CTATATAGAA
GCCGAAATCG TCGGTCTCTC TTTTGCCATC CAGCCCCATG AAGCTATGTA TATTCCCCTC
GGTCACGAGG ATGCCACCGC CCCCCCCCAG CTACCCCGTG AACAGGTTTT AGCGCGGCTC
AAGCCACTGC TAGAAGACCC TCGCCACGGC AAAGTAGGAC AAAACCTTAA ATTCGATTGT
AATGTGCTCG CCAATTACGG TATCGAACTG CAAGGCATTC GTCACGACTC CATGCTGGAA
TCTTATGTGC TTGACAGTAC CGCTACCCGG CACAATATGG ATTCTTTAGC CCTAAAATAC
CTCCAACGAA CTACTATTAC CTATGAGATG GTAGCGGGCA AAGGGGCCAA GCAATTACCC
TTCAACCAGG TTACCATTGA AAAGGCTGCC CCCTATGCGG CGGAAGATGC CGATATCAGT
CTCCAGCTTC ACCATTGTTT CTGGCCCCGC CTGCAACAAG AAGAGGGTCT TCGCCAGCTC
TACCAAGAGC TGGAAATCCC CCTCATCCCC GTGCTTTCCC GTATGGAACG CAATGGAGTC
CAGGTGAATA CGGAGCAACT TAAAGCCCAA AGCGATGAAT TGGCAGCGCG CTTGAAGAGA
CTCGAACAAG AAGCTTTTGA ACTGGCTGGA GAGTCCTTTA ATCTCGCTTC CCCCAAACAG
ATTCAGGCCA TTCTCTACGA GAAGTTAAAA CTGCCGGTAA CCCGCAAAAC CCCTACCGGC
CAACCCTCGA CAGCAGAAAC GGTCCTGCAG GAACTGGCAC TTGATTACCC CCTCCCCCAA
TTGCTCCTCG AATACCGTAC CCTGAGCAAG CTCAAATCCA CCTATACGGA TCGCTTGCCG
TTGCAGGTCA ACTCCCATAC TGGGCGAGTC CATACTTCCT ATCATCAAGC CGTTACTGCC
ACTGGACGCC TTTCTTCTTC CGATCCTAAC TTGCAAAACA TTCCTATCCG CAGTACTGAG
GGCCGGCGAA TTCGCCAAGC ATTTATCGCC CCACCCGGTT ACCGTTTGGT AGCCGCCGAT
TACTCTCAGA TCGAATTGCG CATCATGGCC CATCTCTCGG AAGATGAAGG ACTGCTGGCT
GCTTTCGAAG CGGAAGAAGA TATCCACCAG CGAACAGCCA CCGAAATTTT CCGCACGCCC
CTGGAGGATG TGACTCCTGA ACAACGGCGC AGCGCTAAGG CCATCAATTT TGGCCTCATC
TATGGTATGT CCGCCCATGG GCTTGGCCGG CAACTGGGAA TCAACCGTAC CGCCGCACAG
CACTATATAG AACGCTACTT TCAACGCTAC CCTGGCGTTA AAGCCTATAT GGAGAATATC
TGCCAGCAAG CCCGCCAGAA AGGTTATGTG GAAACTCTCT TTGGCCGACG GCTTTATCTG
CCTGAAATCC ACTCCCGGCA AACCCAACGC CGCAATCAGG CCGAACGCAC TGCCATTAAT
GCCCCCATGC AGGGCAGCGC AGCGGATATC ATCAAGCGGG CAATGATCCA CGCTGACCGC
TGGTTGCAGG AACAAAAAGC TAACGCCCGA ATGATCATGC AAGTTCACGA TGAGCTGGTG
TTTGAGGTGG CAGAAGATAA GCTGGAGGCT ACAATTAGGG CAATCCGGGA GAACATGGCC
GCAGCCGCCC AGCTCAAGGT ACCGTTAATC GTGGAGATAG GCAGTGGCAC TAACTGGGAC
GAAGCCCACT GA
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| Protein sequence | MNMAENPVLI LIDGSSYLFR AFHALPSLTT SKGQPTGAIY GVINMLRKLL DEYQPQYIAV
VFDAKGKTFR HELFEQYKDH RPPMPEELAC QIQPLHDLIR ALGLPLLCVK GVEADDVIGT
LARQATAQRL ETLISSGDKD LAQLVNPHVS LVNTMNLSKL DPAGVKAKFN VSPEQIVDYL
ALVGDTVDNI PGIPGIGPKT AAKLLCQYHS LDQIMAYASE IKGKMGESLR SHLTQLPLAK
ELATVRQDLL LDLGPKDLRC APPNIPALRE LYAALEFKSW LRELLDNENA HSSISNSSTN
SAPAYETVFS EESFENWVAR LEKAELFAFD LETNNLDYIE AEIVGLSFAI QPHEAMYIPL
GHEDATAPPQ LPREQVLARL KPLLEDPRHG KVGQNLKFDC NVLANYGIEL QGIRHDSMLE
SYVLDSTATR HNMDSLALKY LQRTTITYEM VAGKGAKQLP FNQVTIEKAA PYAAEDADIS
LQLHHCFWPR LQQEEGLRQL YQELEIPLIP VLSRMERNGV QVNTEQLKAQ SDELAARLKR
LEQEAFELAG ESFNLASPKQ IQAILYEKLK LPVTRKTPTG QPSTAETVLQ ELALDYPLPQ
LLLEYRTLSK LKSTYTDRLP LQVNSHTGRV HTSYHQAVTA TGRLSSSDPN LQNIPIRSTE
GRRIRQAFIA PPGYRLVAAD YSQIELRIMA HLSEDEGLLA AFEAEEDIHQ RTATEIFRTP
LEDVTPEQRR SAKAINFGLI YGMSAHGLGR QLGINRTAAQ HYIERYFQRY PGVKAYMENI
CQQARQKGYV ETLFGRRLYL PEIHSRQTQR RNQAERTAIN APMQGSAADI IKRAMIHADR
WLQEQKANAR MIMQVHDELV FEVAEDKLEA TIRAIRENMA AAAQLKVPLI VEIGSGTNWD
EAH
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