Gene Noc_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0552 
Symbol 
ID3706745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp595935 
End bp596564 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content52% 
IMG OID637737061 
Productcytochrome c, class I 
Protein accessionYP_342602 
Protein GI77164077 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCAA AACGTTTCGC AGTCGCCGTT GCCTGTCTCC TGTTTGCCTC TTCCTCCAGC 
GCCGCCACGG TAACGGGCGA TCCGGAAGCT GGCGCGGATA CAGCCACGGG CACCCCTTGC 
CAAAGCTGCC ATGGCTCTGA CGGTAACAGC CCCAGTGCCG AATGGCCTAA GTTAGCGGGC 
CAAAACGTCA ACTATCTTAA AAAACAATTG CAGGATTATA AATCCGGCGC CCGGATGAAT 
GCGATTATGT CATCAATGGC GGCCAATCTT AGTGATAAAG ATATCGCCAA TCTTGCGGTC 
TATTATTCCA ACCAGACGAT TACCGAAGGC AACACGCCAG AGCAATACCT TGAGCTAGGA 
CAAAAAGTCT ACCGACAAGG CAATAAAGAA AGCGGTGTTC CCGCTTGTAT AGCCTGCCAT 
GGTCCTGCGG GGCAAGGCAA TCCCGCGGCC AGTTGGCCTC GTCTTTCAGA CCAACATGCA 
GCCTATGTGG AAAATCAGCT CAAAAGCTAT CGCGACGGTG ATCGTAGCAA CGGTCCCAAT 
CAGATGATGC AAGGAGTTGC AAAAAAAATG ACCGATGAAG AAATCACCGC AGTGTCCCAC 
TATGTTTCAG GCCTGCAGGC GGCCCATTAG
 
Protein sequence
MTSKRFAVAV ACLLFASSSS AATVTGDPEA GADTATGTPC QSCHGSDGNS PSAEWPKLAG 
QNVNYLKKQL QDYKSGARMN AIMSSMAANL SDKDIANLAV YYSNQTITEG NTPEQYLELG 
QKVYRQGNKE SGVPACIACH GPAGQGNPAA SWPRLSDQHA AYVENQLKSY RDGDRSNGPN 
QMMQGVAKKM TDEEITAVSH YVSGLQAAH