Gene Noc_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0538 
Symbol 
ID3706730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp576386 
End bp577105 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content54% 
IMG OID637737046 
Producthypothetical protein 
Protein accessionYP_342588 
Protein GI77164063 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACACTTT TAGATCCTCT TTTTACCACC TCTTTCACCT TCGCCCTTTT GCTGGGTTTG 
CTGAGTGGAC TGCATTGTGT TGCCATGTGC GGGGCGATCA TCGGCACGCT AACCTTGAGC 
TTGCCACGGG AAATCCGCAG CGACAAAAAG CGATTACTCA CTTTTGTCTT TGCCTATAAT 
TTAGGCCGAG TCGCAAGTTA CATTACCATG GGATTCATAA TGGGGTTGCT GGTGGGGTTA 
CTGGGTTCCC TCAGCCATCC TCTAGTCTTC GGGGTCTCAG GACACGATAT ATTGCAGGCG 
GTTTCATCCC TTATCATGTT GGGCACGGGA TTGTATCTTG CTAATTGGTT CCCCCGCTTT 
GCTGTGGTAG AGCGAATAGG TGTTCCTCTA TGGCGCCGGC TAGAGCCCCT GGGGCGGCGG 
CTGATACCCG TTCGCACCCG GACGCAAGCC TTTGTCTTTG GTACTATTTG GGGCTGGCTT 
CCCTGTGGCC TGGTTTACAA TGCCGTTGCG GTAGCCGCCA CTACCGGTAG TGGAACCCAA 
AGTGCCTTGA CCATGCTTGC CTTTGGTATG GGCACTTTGC CAACAGTGAT GAGCACGGGC 
ATTTTTACCG CTTGGATGGC TCACCTCGCT AGCCTCAATC GCCTGCGCCT CGTAGCCGGT 
TTAGTCATTA TCGCCATGGC CCTGGTTAAC TTGCTGGCCG TTGGCTTCTA TAGGGGCTAA
 
Protein sequence
MTLLDPLFTT SFTFALLLGL LSGLHCVAMC GAIIGTLTLS LPREIRSDKK RLLTFVFAYN 
LGRVASYITM GFIMGLLVGL LGSLSHPLVF GVSGHDILQA VSSLIMLGTG LYLANWFPRF 
AVVERIGVPL WRRLEPLGRR LIPVRTRTQA FVFGTIWGWL PCGLVYNAVA VAATTGSGTQ 
SALTMLAFGM GTLPTVMSTG IFTAWMAHLA SLNRLRLVAG LVIIAMALVN LLAVGFYRG