Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0515 |
Symbol | |
ID | 3706687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 556418 |
End bp | 557062 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637737025 |
Product | ribosomal protein L25 |
Protein accession | YP_342568 |
Protein GI | 77164043 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACC TATTTGAACT CCACGCCGAT GTCCGCGTTG AGCAGGGAAA AGGTGCGAGC CGCCGCCTGC GTCGCGCCGG CAAGGTGCCC GCCGTTTTAT ATGGCGCTGC AAAAGAGCCT ATTTCTCTTC TTTTTGATCA TAACTTGCTT TTTCGGCATC TAAGCCATGA TGCATTTTAC TCCCATATCT TAACTATCCA TGCGAATGGC AAGGCGGAAA GGGTGGTCCT TAAAGCCTTG CAACGAGATC CGGTTAATCC CAACAAAGTG CTCCACCTGG ATTTGCAACG AGTTAGCTCT ACCCAAAAGC TGACTATCAA GGTGCCTCTA CATTTTATTG GCGATGAGAT GGCTCCTGGG GTGAAGCAAG AAGGCGGTAC GGTGGCCCGT CTTCTGAACG ATATTGAGAT TAGTTGCTTG GCTAAAGACT TGCCTGAGTA TATCGAAGTT GATTTAGCCG ATTTAGGGGT TGGCGAGACG GTCCATCTAT CCGATCTGAA GCTCCCCGGG GGGGTTGAGA TTCCAGCATT GAAGCTTGGC GAGGATTACG ATCAACCGGT GGTCACTATC CATAAGCCCC GGGCTGCTGC CGAGGAAGAA GATACAGGCG CTGAAGGCGA CGTTGAAGCC GCTGATGCCG AATAG
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Protein sequence | MENLFELHAD VRVEQGKGAS RRLRRAGKVP AVLYGAAKEP ISLLFDHNLL FRHLSHDAFY SHILTIHANG KAERVVLKAL QRDPVNPNKV LHLDLQRVSS TQKLTIKVPL HFIGDEMAPG VKQEGGTVAR LLNDIEISCL AKDLPEYIEV DLADLGVGET VHLSDLKLPG GVEIPALKLG EDYDQPVVTI HKPRAAAEEE DTGAEGDVEA ADAE
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