Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0502 |
Symbol | |
ID | 3706673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 542359 |
End bp | 543291 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637737011 |
Product | porphobilinogen deaminase |
Protein accession | YP_342555 |
Protein GI | 77164030 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCAA AGACCTGTCT TCGCATAGCC ACCCGTAAGA GTCTTCTCGC TTTATGGCAG GCTGAATATG TTGCTGATAC CTTGCGTCAC CACTATCCTG ATTTGAACAT AGAGCTGGTC CGCATGAGCA CCCAGGGCGA TAAAATTCTG GATACGCCCC TGGCCAAGAT AGGTGGCAAA GGATTATTCA TTAAGGAGCT AGAACAAGGT CTCTTTAGTG GAGAGGCTGA TATTGCCGTT CACTCCATGA AAGATGTGCC GGTGGATTTG CCTGAAAATC TCCATATAGC GGTTATTTGC CAGCGAGGCG ACCCGCGGGA TGCTTTTGTC TCCAATCATT GGCAGGATTT GGATAGTTTG CCGGAGGGTG CGCGAGTGGG AACTTCAAGT TTACGCCGGC AAAGCCAAGT GCGGGAGCGT CGCCCTGACT TCCAGGTTTT GGATCTGCGC GGTAATGTGA ATACGCGTCT AGCTAAATTA GATAATAACG AATTTGATGC TATTATTTTG GCCGCTGCGG GCTTAAAACG CTTAGAGTTA ACCCAACGAA TAAGGGAATC GCTGGCTCCC GAAGTCAGTC TTCCTGCTAT CGGTCAGGGG GCTATTGGCA TTGAATGCCG AAAAGGGGAT ACCGCTACCG AGGAACTTAT TAAAGTGCTC GAACATCCTC CGACGCGGAT TACCATTCGT GCGGAGCGGG CATTAAATGC ACGGCTTGCC GGTGGTTGCC AGGTGCCTAT TGCTGGCTAT GCTGAGCTAG AGGATGAACG ACTGCGGCTG CGTGCGCTGG TGGGACAGCC TGATGGCGGC CGGGTTATCC GAGGAGAAAC ATGGGGAATG CCTGGGGAAG CAGAAAGTTT AGGCGCATCG CTAGGTGAGG ATTTGCTTCG GCGGGGGGCG GATAAGATCC TGGCAGAGGT TTACAGTGGC TGA
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Protein sequence | MSAKTCLRIA TRKSLLALWQ AEYVADTLRH HYPDLNIELV RMSTQGDKIL DTPLAKIGGK GLFIKELEQG LFSGEADIAV HSMKDVPVDL PENLHIAVIC QRGDPRDAFV SNHWQDLDSL PEGARVGTSS LRRQSQVRER RPDFQVLDLR GNVNTRLAKL DNNEFDAIIL AAAGLKRLEL TQRIRESLAP EVSLPAIGQG AIGIECRKGD TATEELIKVL EHPPTRITIR AERALNARLA GGCQVPIAGY AELEDERLRL RALVGQPDGG RVIRGETWGM PGEAESLGAS LGEDLLRRGA DKILAEVYSG
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