Gene Noc_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0406 
Symbol 
ID3706577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp450015 
End bp451019 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content46% 
IMG OID637736918 
Producthypothetical protein 
Protein accessionYP_342462 
Protein GI77163937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.953246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGAG TCCGGATTGA TGATGCCCTT GCCGATTGGG GAAATTTGGC TAAGGAGAAT 
TGGCAGTCTC TGCTGCTTGG TAATGGATTC AGTATTAACG TATGGAGTGG TTTCAACTAC
GACAGCCTTC TTCAGGTTGC ACGACAAGAT GACCTTGAGC ATCAGCTAAA CGAAGAATCC
GTGACTCTAT TTGATCATGT CGGAAGTTCA AATTTCGAGG ACGTCTTGCG AATACTTTTC
CACGCCAGGA TGGTTGACGA GCAACTCGGG AGACCTCAAG GGGATGAAAT TGAAGCGATT
TATCAGAACA CGAAACGTGC TTTGGCAGAT GCCGTCAATT ACTCTCATGT CGCATACGGT
CAGTTCAACG CTGCGGCGAT AAACGAACAG TTGGGTGGCT ACGATGATGT GTTCACGACC
AACTACGACT TGATCCCATA TTGGTCAATA ATGCACGAAG GTGTGGATCG GTTTCGGGAC
TTTTTTTGGG GTGCTGACGG GGTTTTTGAG TTATGCAACA CTGAGGTATT CCCTAGGCGT
ACAAAGATTC ATTACCTCCA TGGGGCCATT CACTTAGTTG AACTTCCGGA TGGTCGCACG
AAGAAGCTGG CGACAAATCA AAACGGCAAT TTGCTCGAAT TGTTTGATCT TAATGCGAGG
GATCAATTCC CTCTCTTTAT TTCTGAGGGA CATTGGCAAC AGAAATTGTC TCGAATATGT
AAAAATGACT ATCTACGGTT CTGCTTTTCG AATCTGAGCG GTCTAGAAGG TAATGCTGTA
ATTATTGGGC ACTCCCTGCA TCGCGACTAC GATCAACATA TCATCGATGC GATTTCTCAA
AGCTCAGTGG ACAGATTGGC TATTGGTGTT TGGCCGCACC AGCGCGCTGA GGTCATCCTG
GATTTCAAGG CTCGAATCAT AGAGCAGTTG CATCAGAAGT CATTGGACTT TTTCGATTCT
GAATCTCACC CCCTGGGATC TGAGGTTTTA CGTGTCGAGA AATAA
 
Protein sequence
MTGVRIDDAL ADWGNLAKEN WQSLLLGNGF SINVWSGFNY DSLLQVARQD DLEHQLNEES 
VTLFDHVGSS NFEDVLRILF HARMVDEQLG RPQGDEIEAI YQNTKRALAD AVNYSHVAYG
QFNAAAINEQ LGGYDDVFTT NYDLIPYWSI MHEGVDRFRD FFWGADGVFE LCNTEVFPRR
TKIHYLHGAI HLVELPDGRT KKLATNQNGN LLELFDLNAR DQFPLFISEG HWQQKLSRIC
KNDYLRFCFS NLSGLEGNAV IIGHSLHRDY DQHIIDAISQ SSVDRLAIGV WPHQRAEVIL
DFKARIIEQL HQKSLDFFDS ESHPLGSEVL RVEK