Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0373 |
Symbol | |
ID | 3706544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 409334 |
End bp | 411409 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637736885 |
Product | glycine--tRNA ligase |
Protein accession | YP_342429 |
Protein GI | 77163904 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.87078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGAGA CCCGGGATCT TTTAATCGAA ATTGGTACTG AGGAGCTACC TCCTAAGGCC CTGCGCAAGC TATCCGAGAG TTTGCTCCAA GAACTTAGCC ATGGGCTGCA GGCGGCGGGA TTAATCTATG GGGATTTAAA AGGCTATGGT GCGCCGCGCC GTTTGGCGGT ATGGGTACAA GCCTTGACCG TTTCTCAACC TGAACAGGTA CTGGAGCGCC GGGGGCCAGC ATTGGCTGCA GCCTTTAACG AAGAGGGTAA GCCTACCGCC GCGGCCCGAG GGTTTGCCGG TAGTTGCGGC GTACCGGTAG AGGCACTAGA GAGTTTGAAG AATGAGAAAG GGGCTTGGCT AGTGTACCGG CAACGTCAGC AGGGGGCGCC CACCCGAGAA TTACTGCCAG CTATCCTGGC CCAGGCACTT CAGGCGTTAC CCATTCCCAA GCCCATGCGC TGGAGTGATC TCCCAGGGGA GTTCATACGC CCGGTTCATT GGCTAGTCTT GCTTTTTGGA GAAGAGGTGA TCCCGGCGAC TCTACTGGGT GTCCAAGCGG GTCGGGAAAC TCAGGGACAT CGTTTTCATC ATCCCGAACC GCTCTATCTG ACAGAGCCTG CTGCTTATGC AACTCTGCTG GAAACTGAAG GTAAGGTGCT CGCTGATTTT GCTGTTCGCC GGGAAGCCAT CTATACCCAG GTAGTGGCGG CTGCCCAGCA GATGGGCGGA AAAGCCCTGA TTGAAGAAGC TTTGCTAGAT GAGGTGACGG GCTTGGTGGA ATGGCCCGTG GCCTTGGCTG GCCAGTTTGA TGGAGATTTT CTCAAACTGC CGGCAGAGGT GCTCATCGCC ACTATGCAAG ATCATCAGAA GTATTTTCCA GTACAGGATG AGCAAGGACA TTTGCTGCCC TGCTTTATTA CTGTATGTAA TATTGAGAGT CAACGTCCGG AGGTTGTGGT AGAGGGCAAT GAGCGAGTCA TTCGGCCCCG CCTTACCGAT GCAGCCTTTT TCTATGCCAC TGATCGCAAG GAATCTCTGG CTAGCCGTTG CGAGAGACTT AAAAAGATCA CCTTCCAAGA GAAATTAGGC AGCGTTTTTG AGAGGACTGA GCGGTTGGCT AAACTTGCTT GGCATATTGC CAAGGATATT GGCGGCAATG GGGATTGGGC CAAGCGTGCT GGATTGTTGT CCAAGTGTGA CCTGGTGACT GAGATGGTCA CCGAATTCCC AGAGCTACAA GGGAGTATGG GCCGCTATTA TGCCCTCCAC GATCATGAAC CTCAAGAAGT TGCCGAAGCG CTTAGAGAGC AATATCTGCC CCGCTTTGCC GGTGATGTGC TGCCACGCAC TGCCACTGGC CAGGCGTTAA GTTTGGCGGA TCGCTTAGAT ACCTTGGTAG GATTATTCGG TATTGGCGCG CCGCCAAGCG GTGATAAAGA TCCCTATGGT TTGCGTCGGG CTGCGCTGGG TGTATTGCGT ATTATTATCG AGTCCGGGCT TGCGCTGGAT CTGCCTTCTT TACTCAAGAG AGCCTGTGAA ACCTATAATG ATCGTTTAAC CGAGAAAAAT ACTGCAGTTC AAGTCCATGC TTACTTACTA GAACGTCTTC GGGGTTATTA TTTGGAAGCG GGCTTTCGGC CTGATGAAAT CGAAGCAGTT TTAGCTGTAA GGCCGGACCA ACCTCTGGAC TTTGACCGCC GTCTCAAAGC GGTGGCTTCT TTCCGCAAGC TTCCAGAAGC TGAGTCTTTA TCGGCGGCCA ATAAGCGAAT CCGAAACATT CTACGCAAGA GCGGGGAAAA ACTTCCAGCA CAAATTGAAT CTGATCTACT GCAAGACCCC GCGGAGCAGA CTCTTGCAAC TCAGATGTAC AGTTTGGAAC GGGAAATGAT GCCTTTATTA GAGAGGCAGG ATCACCGTGC TACGCTGACG GCTCTAGCCG GTTTGCGGGG CGCGGTAGAT CAATTTTTTG ACGAGGTGAT GGTCATGGTG GAAGATCCGA AACTGCGGGC TAACCGTTTA GCTTTACTAG CTCGTTTGCA AACATTATTT CTTCAGGTGG CGGATATTTC CCGCTTGCAG GCTTGA
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Protein sequence | MAETRDLLIE IGTEELPPKA LRKLSESLLQ ELSHGLQAAG LIYGDLKGYG APRRLAVWVQ ALTVSQPEQV LERRGPALAA AFNEEGKPTA AARGFAGSCG VPVEALESLK NEKGAWLVYR QRQQGAPTRE LLPAILAQAL QALPIPKPMR WSDLPGEFIR PVHWLVLLFG EEVIPATLLG VQAGRETQGH RFHHPEPLYL TEPAAYATLL ETEGKVLADF AVRREAIYTQ VVAAAQQMGG KALIEEALLD EVTGLVEWPV ALAGQFDGDF LKLPAEVLIA TMQDHQKYFP VQDEQGHLLP CFITVCNIES QRPEVVVEGN ERVIRPRLTD AAFFYATDRK ESLASRCERL KKITFQEKLG SVFERTERLA KLAWHIAKDI GGNGDWAKRA GLLSKCDLVT EMVTEFPELQ GSMGRYYALH DHEPQEVAEA LREQYLPRFA GDVLPRTATG QALSLADRLD TLVGLFGIGA PPSGDKDPYG LRRAALGVLR IIIESGLALD LPSLLKRACE TYNDRLTEKN TAVQVHAYLL ERLRGYYLEA GFRPDEIEAV LAVRPDQPLD FDRRLKAVAS FRKLPEAESL SAANKRIRNI LRKSGEKLPA QIESDLLQDP AEQTLATQMY SLEREMMPLL ERQDHRATLT ALAGLRGAVD QFFDEVMVMV EDPKLRANRL ALLARLQTLF LQVADISRLQ A
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