Gene Noc_0353 details

Gene Information

• Locus tag: Noc_0353
• ID: 3706524
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: -
• Start bp: 387074
• End bp: 387676
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637736865
• Product: periplasmic or secreted lipoprotein
• Protein accession: YP_342409
• Protein GI: 77163884
• COG category: [R] General function prediction only
• COG ID: [COG2823] Predicted periplasmic or secreted lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTCA GCCTCACTAT TTTGCTATTC TGTTTCATAA TAATTTTTCA AGGCTGCGTT 
GCTGTGGTCG CAACCGGAGT CGCCGCTGGC GCGGCTACCG GTGTTTCCAC GGCCTATGAT 
CGCCGCACTT TCAATACCGT CATCGATGAT CAAAGTATTG AACTTAAGGC CAGCGCCGCC 
CTCCGCAATG ACCAGGAGCT CCATGAAAAT ACTCATATCA ACGTCACTAG TTACAATGGC 
ATCGTCTTAC TGACGGGGGA AGCGCCGAGC AAGGAGCTCA AAAAAAAAGC CGCGGAGCTA 
GTTAAGCCGA TTTCAGACGT CAAGCAAATC TACAATGAAG TAGATATTCT GGCACCTAGT 
TCCCTAGTCT CCCGTTCCAG CGACTCCTGG ATCACCACCA AGGTTAAAAC CAAAATGACC 
GCTAGGAAAG GACTCAATCC CGCCCGCATT AAAGTGGTGA CTGAACGAGG CACGGTTTAC 
CTGATGGGAC TGGTAACTCC CCAGGAAGCC GAGCGGGCCG TTGCTGTAAC CAGTCATACT 
GGCGGCACCC AGCGAGTCGT CAAAATTTTT GAGTATTTAC ACGAAACCGC CCTTGAACAA 
TAG 

 

Protein sequence

MKLSLTILLF CFIIIFQGCV AVVATGVAAG AATGVSTAYD RRTFNTVIDD QSIELKASAA 
LRNDQELHEN THINVTSYNG IVLLTGEAPS KELKKKAAEL VKPISDVKQI YNEVDILAPS 
SLVSRSSDSW ITTKVKTKMT ARKGLNPARI KVVTERGTVY LMGLVTPQEA ERAVAVTSHT 
GGTQRVVKIF EYLHETALEQ