| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0314 |
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| Symbol | |
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| ID | 3706485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 340167 |
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| End bp | 341420 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637736828 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_342372 |
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| Protein GI | 77163847 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAT ATTTTCATTA CCGCTATAAC GTTTTATGGG CGGAAGAGAT TCCCTTGCCG
GAGATTGCAA GCCGTTTTGA CACGCCCTGC TATGTTTATT CTCGCGCTGC GATTGAGCAT
CAGTGGCGGG CGTTTGATCA AGCTTTTGAG AAGCATCCCC ACCAAATATG CTATGCAGTG
AAAGCAAATT CTAATCTAGC GGTTTTAAAT ATTTTAGCCC GTTTGGGGTC GGGCTTTGAT
ATTGTGTCGG TAGGCGAGCT GGAACGGGTG TTGGCGGCAG GGGGCGATCC TGGACGGATC
GTGTTCTCTG GCGTGGGTAA GCGTGCTGAC GAGATGGAGC GGGCTCTTGC TGTCGGTATT
GCTTGCTTCA ATGTGGAATC CGAAGCCGAG TTGATCCGTT TGAATGAGAT TGCTGGCAAG
TTGGAGCAGC GGGCGCCGGT GTCTTTACGA GTAAACCCGG ACGTGGACGC GCGCACCCAC
CCTTATATTG CGACGGGGTT GCGTGATAAT AAATTCGGTA TAGAAATCGA TCAGGCTCTG
GCGGTTTATG CTCGTGCGGC TACCCTACCT CATATCGATA TCCTTGGGGT GGATTGTCAT
ATCGGCTCTC AGCTTACTTC TTTATCCCCT TTTTTGGCTG CTCTGGAACG GGTATTAGCG
TTAGTAGACC AACTCGCCGA GAGAGGGATT AAAATCCGCC ATATTGATCT TGGAGGTGGT
TTGGGAATTA TCTATCGGGA TGAGGCGCCT CCAAGCCCTC AGCAGTATGC CGCGGCTTTA
CGGCAGAAAT TAGCGGGGAG AAACTTGGAA ATATGGATCG AACCCGGTCG AGCCATTGTT
GGCAACGGAG GAGTGTTGCT AACTCGGATC GAGTACCTTA AACAGGCGCC CCAGAAGAAT
TTCGCCATCG TGGACGCAGC GATGAATGAT TTGCTTCGTC CAGCGCTCTA CGATGCCTGG
CAGGAGATTA TCCCGGTGGC TGTGGACGCC ACGGGGGAAC CGCTCTTTTT TGACGTGGTG
GGTCCAGTGT GCGAGACCGG CGATTTTCTT GGCAAGCGGC GCCAGCTTGC CATTGAGGCA
GGAGATTTAC TTGTAGTGCG TGCTGCGGGG GCCTATGGTT TTACTATGAG TTCCAATTAT
AACTCCCGGC CCCGAGCTGC TGAGATAATG GTGGACGGCG CTGAGGCCCA TTTAGTACGG
GAGCGGGAAA CCGTGGAGTC CCTCTATCGG GGTGAAGCGA CCTTGCCTGG ATAG
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| Protein sequence | MMEYFHYRYN VLWAEEIPLP EIASRFDTPC YVYSRAAIEH QWRAFDQAFE KHPHQICYAV
KANSNLAVLN ILARLGSGFD IVSVGELERV LAAGGDPGRI VFSGVGKRAD EMERALAVGI
ACFNVESEAE LIRLNEIAGK LEQRAPVSLR VNPDVDARTH PYIATGLRDN KFGIEIDQAL
AVYARAATLP HIDILGVDCH IGSQLTSLSP FLAALERVLA LVDQLAERGI KIRHIDLGGG
LGIIYRDEAP PSPQQYAAAL RQKLAGRNLE IWIEPGRAIV GNGGVLLTRI EYLKQAPQKN
FAIVDAAMND LLRPALYDAW QEIIPVAVDA TGEPLFFDVV GPVCETGDFL GKRRQLAIEA
GDLLVVRAAG AYGFTMSSNY NSRPRAAEIM VDGAEAHLVR ERETVESLYR GEATLPG
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