| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0264 |
|---|
| Symbol | gltX |
|---|
| ID | 3706338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 291742 |
|---|
| End bp | 293151 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637736780 |
|---|
| Product | glutamyl-tRNA synthetase |
|---|
| Protein accession | YP_342324 |
|---|
| Protein GI | 77163799 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.530461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTTC GTACCCGTTT TGCCCCTAGC CCTACTGGCT ATTTGCATGT AGGAGGTGTC
CGTACGGCCC TTTTTTCCTG GCTTTATGCA CGCAAACATG GCGGCCGTTT TATCTTACGT
ATAGAAGATA CGGACCGAGA ACGGTCTTCT ATGGAGTCGG TCAATGCCAT CCTTGAGGGA
ATGACTTGGT TAGGTTTGGA GTACGATGAG GGGCCTTTCT ATCAAACCAA TCGTTTCTCC
CGCTACCGGG AGATCATTGA GCAATTACTA GCTTCCAATC ACGCCTACCT TTGTTATTGC
ACCCGAGAAG AACTTGCAAG CATGCGGGCC GAGCAAATGG CGCGTAAGGA AAAGCCTCGT
TACGATGGAC GGTGTCGGGA ACGGCATTCT CCACGGGAAG GCGTTTCTCC CGTGGTTCGT
TTCAAGTCTC CCCTGGAAGG GCGAGTTGTT ATACGGGATC TCGTGCGTGG TATGGTAATC
TTCCAGAATA ATGAATTGGA TGACTTAGTA CTTGCCCGCA CGGATGGCAC TCCCACTTAT
AACCTGACCG TAGTCGTGGA TGACATGGAT ATGGGGATGA CTCATGTCAT TCGGGGTGAT
GATCATCTCA ATAACACCCC CCGTCAGAGC AACATTTTTT ATGCGCTTGG CAAAGAACCG
CCGGTTTATG CCCATGTACC TATGATCCTG GGGCCAGACA GACAGCGCCT ATCAAAACGC
CATGGCGCCG TCAGTGTTAT GAATTACCGG GAGGCGGGAT ATCTACCCGA AGCATTACTG
AACTATCTGG TGCGTTTGGG TTGGTCCCAT GGAGATCAGG AAATTTTCAG CGTGGCTGAA
ATGATCAAAT TATTTGACAT TGAAGACGTC AATCAGTCTG CTTCTACTTT TAACTCCGAG
AAGCTGCTTT GGCTTAATCA GCAATATATC AAAAATAGTG CCCCCGAACA CATTGCTCAT
CATTTGAGCT GGCACTTAGG TCAGCTGGGA ATAGATCCCT CTAAAGGGCC GGATTTAGCC
GCCGTCGTTA AGGCTCAGCA AGAACGATCA AAAACGCTAC TAGAAATGGC CCATAACAGC
GCACCATTTT ATCGTGAATT TGAAGCTTAT GAAGAAACAG CAGCCCGTAA GCATCTTAAT
GCTTCCGTGC TGGGACCATT ACGGGATCTG CGTGAGCGTT TTAAGGAAGC CCAATCCTGG
GTAGCGCCCG CTCTTCACGA AATCATCTTG GCAACAGTGG AGAGTCATCA TTTGAAATTG
GGTAAATTAG CTCAGCCCTT GCGGGTTGCA ATAATGGGAC GCCCTATTTC ACCACCGATT
GATGTTACTC TTGAATTGAT GGGGCAAGCA ACAACACTAG CTCGCATTGA TCGGGCACTT
GCCTGGATTG ACCATAGGAG CAATGCCTAA
|
|---|
| Protein sequence | MTVRTRFAPS PTGYLHVGGV RTALFSWLYA RKHGGRFILR IEDTDRERSS MESVNAILEG
MTWLGLEYDE GPFYQTNRFS RYREIIEQLL ASNHAYLCYC TREELASMRA EQMARKEKPR
YDGRCRERHS PREGVSPVVR FKSPLEGRVV IRDLVRGMVI FQNNELDDLV LARTDGTPTY
NLTVVVDDMD MGMTHVIRGD DHLNNTPRQS NIFYALGKEP PVYAHVPMIL GPDRQRLSKR
HGAVSVMNYR EAGYLPEALL NYLVRLGWSH GDQEIFSVAE MIKLFDIEDV NQSASTFNSE
KLLWLNQQYI KNSAPEHIAH HLSWHLGQLG IDPSKGPDLA AVVKAQQERS KTLLEMAHNS
APFYREFEAY EETAARKHLN ASVLGPLRDL RERFKEAQSW VAPALHEIIL ATVESHHLKL
GKLAQPLRVA IMGRPISPPI DVTLELMGQA TTLARIDRAL AWIDHRSNA
|
|---|
| |