Gene Noc_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0258 
Symbol 
ID3706332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp284443 
End bp285150 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content53% 
IMG OID637736774 
Producthistidine biosynthesis 
Protein accessionYP_342318 
Protein GI77163793 
COG category[R] General function prediction only 
COG ID[COG1411] Uncharacterized protein related to proFAR isomerase (HisA) 
TIGRFAM ID[TIGR00734] hisA/hisF family protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTCC TTCCGGTGCT TGATTTATGG GGTGGGGTAG TCGTTCATGC TAGGGGCGGG 
CAACGGGATA GTTACTTGCC TTTAAATTCC CCCTTTGCTC CTAATTCTTC GCCTTTACAG
GTAGTGGCCG GATTGCTGCA ATGGTGCCGC TTCCAACAAT TATATATTGC TGATTTAAAC
GCTATTATGG GGGATGGCAA TAATCATTTC ATGATAGCCG CTATTGCGCG AAGTTATCCT
GATTTAGAAT TATGGGTAGA TGGGGGAACC GCCCGCCATG AAGCGGTCGC CCAGTTATTT
GCGCTCGGGG TTGCACGGCC CGTGGTAGGA ACGGAAACCC TACCTGATTT AGAATCCTGG
CAAGCGCTGC AAAGCTCGTG GCCGGAACAG CTAGCACTCT CTATGGACCA CCGGAGGGGA
GCATTTCTTG GCCCCGCGGG ATTGGATCGG CAACCAGAAT TGTGGCCGGG GACCGTCATT
GCCATGAGTC TGGATCAAAT AGGGAGCCAG CAAGGACCGG ATTGGTCCCT ATTGGAACGG
TTAGGGCAAA GATCTCTCCG CAAGAGGATA TCTTTGTTGG CAGCAGGGGG AGTCCGTTGT
TTGGAGGATT TAAAGCAGCT CGCAGCATGG GGGGTCGAAG GGGTATTGTT GGCGAGCGCC
TTGCATGATG GTAGCCTAAA TCCTGCGGAA TTGCAGCAGA TGTTATAA
 
Protein sequence
MQLLPVLDLW GGVVVHARGG QRDSYLPLNS PFAPNSSPLQ VVAGLLQWCR FQQLYIADLN 
AIMGDGNNHF MIAAIARSYP DLELWVDGGT ARHEAVAQLF ALGVARPVVG TETLPDLESW
QALQSSWPEQ LALSMDHRRG AFLGPAGLDR QPELWPGTVI AMSLDQIGSQ QGPDWSLLER
LGQRSLRKRI SLLAAGGVRC LEDLKQLAAW GVEGVLLASA LHDGSLNPAE LQQML