Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0237 |
Symbol | |
ID | 3706292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 260991 |
End bp | 262334 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637736753 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_342297 |
Protein GI | 77163772 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGA AGCTTTATAT TAAGACTCAT GGCTGTCAGA TGAATGAATA CGATTCTAGC CGGATGGCCG ATGTATTGCG GGAATCCCAC GGGCTAGAAC TGACTTCTGA CCCTGAGCAA GCGGAAGTGC TGTTACTCAA TACCTGCTCC GTGCGGGAAA AAGCCCAAGA AAAAGTCTTT TCCCAGTTGG GCCGATGGCG GCAGCTAAAG CAATCGCGTC CTGAATTAGT TATTGGGGTC GGCGGCTGTG TTGCTAGTCA AGAGGGTGAA ACGATTCGCG TCCGGGCGCC CTATGTGGAT CTGGTGTTTG GACCCCAAAC AATACACCGG TTACCAGCAA TGCTGACTCA GGCAAAGGCA AGCTCACAGC CAGTGGTCGA TCTTTCTTTT CCTGAAATTG AGAAGTTTGA CAAATTGCCT GAACCCCGCG CTGAGGGTCC AACCGCTTTT GTCTCCGTGA TGGAAGGGTG TAGCAAGTAT TGCTCTTTTT GTGTCGTGCC TTATACCCGG GGCGAGGAAA TCAGCCGGCC TTTCGACGAT GTCATTGCCG AGATCGTGGG TCTGGCGGAG CAGGGAGTGC GGGAAATTAC CCTGTTAGGC CAGAACGTGA ATGCCTATCG GGGGTCCATC GGGGAGGGAG ATACTGCCGA TCTTGCCCTG CTGATCCACT ATGTGGCCTC TATTGAGGGT ATTGAGCGCA TCCGCTTCAC GACTTCTCAC CCGGTAGAAT TCTCCGACAG CCTCATCCAG GCTTTTGCCG AGGTGCCAGC GCTGGTTAGC CATTTGCACT TACCAGTACA GAGTGGCTCG GATCGTATGC TGAGTTTGAT GAAACGGGGT CACACTGTGC TGGAGTATAA AGCGAAGCTG CGGAAATTGC GCCAGGTGCG TCCTGATATC AGTATTTCAA GCGATTTCAT CGTTGGCTTG CCCGGCGAGA CTGAGGCTGA TTTCCAGGCT ACGCTAGCGT TAGTGGATGA GGTGGGTTTT GATCATTCTT TCAGTTTTAT TTATAGTCCA AGGCCGGGAA CACCAGCGGC TAGCCTTCCT GATTGCACAC CGATAGCCCT CAAGAAAGAG CGGCTTGCAA TCCTGCAAGG ACGTCTTCGA GCTCTGGAAA TTGCTATTAG TCGAGGGATG GTGGATACCG TACAGCAAGT ACTCGTTGAA CGTCCCTCAA AGAAAGATCC CACCATGCTG GCGGGGCGTA CGGCTAATAA CCGGGTAGTA AATTTTTCTG CCTCTCAAGA CATGGTAGGC CAGTTTGTCA ATATTAGAAT TACAGAGGCT CTGCCCAACT CGCTGCGGGG TATCGTTCTT GATGCTAAAA GACGATGTGC TTAA
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Protein sequence | MAKKLYIKTH GCQMNEYDSS RMADVLRESH GLELTSDPEQ AEVLLLNTCS VREKAQEKVF SQLGRWRQLK QSRPELVIGV GGCVASQEGE TIRVRAPYVD LVFGPQTIHR LPAMLTQAKA SSQPVVDLSF PEIEKFDKLP EPRAEGPTAF VSVMEGCSKY CSFCVVPYTR GEEISRPFDD VIAEIVGLAE QGVREITLLG QNVNAYRGSI GEGDTADLAL LIHYVASIEG IERIRFTTSH PVEFSDSLIQ AFAEVPALVS HLHLPVQSGS DRMLSLMKRG HTVLEYKAKL RKLRQVRPDI SISSDFIVGL PGETEADFQA TLALVDEVGF DHSFSFIYSP RPGTPAASLP DCTPIALKKE RLAILQGRLR ALEIAISRGM VDTVQQVLVE RPSKKDPTML AGRTANNRVV NFSASQDMVG QFVNIRITEA LPNSLRGIVL DAKRRCA
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