| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0218 |
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| Symbol | |
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| ID | 3706273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 241013 |
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| End bp | 242965 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637736734 |
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| Product | Alpha amylase, catalytic region |
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| Protein accession | YP_342278 |
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| Protein GI | 77163753 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATG CCCGTTGGAT GAAGCAGCAT AGTACTGTTT CGCTCAGGCG TCTGATGCCT
CGTCTGGAGG CGCGTTTCAA GGCGCAGGTC GATCCTGACG AGTGGCAGGG TTACGTGCAG
CGCCTAGAGA CCCATTTTCC AAGACTGTTT GATTGCCTAT ATCGCCTCTA TGGTCAGCAA
TATGACTTTT TCTTCCATCT AGAAAGCATT CTGGCGTCGG CTACGGAAAT GTGGTGGGTG
CGCCCCGCCG AACTCAAGGC GTTGGATGCG CTCCGGACTG CCGATCCCTA TTGGTACCAA
TCCCACCGCT TGGTGGGTGC TATGTGCTAT GTGGATCTTT TTGCTGGCGA TTTGGTCGGC
CTGCGCGAGC GTATCTCCTA TTTAACTGAG CTGGGGATTA ATTATTTACA TCTCATGCCA
GTATTTAAGG TGCCCGAAGG GGATAATGAT GGGGGCTATG CCGTCAGTAG CTATCGTGAA
ATCAACCCCA ATCTGGGAAC AATGGAAGAT CTGGTCCGGT TGGCCGATGA GCTGCGCTAT
CGAGGCATTT CCCTCTGCCT GGACTTCGTA TTCAATCATA CTGCCGATGA GCATGACTGG
GCCCGCCGTG CCCAGGCCGG TGATCGAGAG TATCAAGAGT ATTATCGCAT GTTCCCTGAT
CGGGAATTGC CAGATGCTTA TGAGCGTAGC CTCAATCCCA TTTTTCCCGA TGAACATCCA
GGATCGTTTA CTTACCGTAA CCGCATCCGC AAGTGGATCT GGACTAGTTT CCATAATTAT
CAATGGGACT TAAATTATGA AAATCCGGTG GTTTTTAACC GGATGCTGGA AGAAATGCTT
TTTCTTGCTA ATCAAGGGGT GGAGATTCTG CGCCTTGATG CGGTGGCTTT TGTCTGGAAG
GAGCTAGGTA CCAGTTGTCA GAATTTACCC GAAGCGCACA TCATTATCCA GGCTTTCAAT
GCCTTGGTGC GTATCGCCGC GCCGGCCATG GTATTTAAGT CCGAGGCCAT TGTGCATCCG
GATGATGTGA GAAAGTACAT CAGCGAAGAG GAATGCCAAC TTTCCTATAA TCCTCAGCTT
ATGGCTTTGT TATGGGATGC CTTGGCAAGC CGGGACATCC GTCTGCTGCG CTATGGGTTG
CAGCGACGTT TTGCCCTCCC GTCCGGTTGT GCCTGGGTGA ATTATGTGCG TTGCCACGAT
GATATTGGGT GGACCTTTTC TGATGATGAT GCGCGTGCTC TGGATCTCGA TCCCCAGGCT
CACCGCCAGT TTCTTAGCCA GTTTTATACC GCGCGGTTTG AAGGTAGTTT CGCCCGGGGG
ATGCCTTTCC AGGAAAACTT AGCTACTGGA GATGCCCGGG TGTCGGGCAC TTGCGCTTCT
TTGGCAGGAT TGGAAAAGGG CCTTTATCAT AATGATGAAA CAGAAATCGA GTATGCGATC
CGTAAGATCC TGTTGATCCA TGGCGTTATT CTGACTATTG GTGGCATACC GTTGATTTAT
CTGGGTGATG AAATTGGCGT TCTAAATGAT TATGATTATG AAAAAGATTT GGCTAAAATT
GGCGATACCC GCTGGCTGCA CCGATTGCCC TTCGATGAGG CGCGGGCCGA GCAGCGTTGG
GATTTTACCA CTGTTCCTGG CCGAATCTAC CAAGGTTTGC TGCGGCTGAT CCAAATCCGC
CAGCAAAATC TAGCCTTTAC CCGAGCCGAA ACGGAAGTTG TCGACACCGG TAACGATCAT
GTATTTGGCT ATTTCCGCAA CCACGATGAA TACACGGTAC TGATACTGGC TAATTTCAGC
GACTTTACCC AGCATCTGGA AGCTCGGCGG CTGCGGATGT TGGGATTGCG CAAAACCGAG
GTGGACCTTT TTGCAGGTAA AACCGTTACT GCCACCCGCG AATTGAGCCT GGAACCCTAC
GCTTTCATGG TGCTGGCCAG GCCTGGCAAA TAA
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| Protein sequence | MSDARWMKQH STVSLRRLMP RLEARFKAQV DPDEWQGYVQ RLETHFPRLF DCLYRLYGQQ
YDFFFHLESI LASATEMWWV RPAELKALDA LRTADPYWYQ SHRLVGAMCY VDLFAGDLVG
LRERISYLTE LGINYLHLMP VFKVPEGDND GGYAVSSYRE INPNLGTMED LVRLADELRY
RGISLCLDFV FNHTADEHDW ARRAQAGDRE YQEYYRMFPD RELPDAYERS LNPIFPDEHP
GSFTYRNRIR KWIWTSFHNY QWDLNYENPV VFNRMLEEML FLANQGVEIL RLDAVAFVWK
ELGTSCQNLP EAHIIIQAFN ALVRIAAPAM VFKSEAIVHP DDVRKYISEE ECQLSYNPQL
MALLWDALAS RDIRLLRYGL QRRFALPSGC AWVNYVRCHD DIGWTFSDDD ARALDLDPQA
HRQFLSQFYT ARFEGSFARG MPFQENLATG DARVSGTCAS LAGLEKGLYH NDETEIEYAI
RKILLIHGVI LTIGGIPLIY LGDEIGVLND YDYEKDLAKI GDTRWLHRLP FDEARAEQRW
DFTTVPGRIY QGLLRLIQIR QQNLAFTRAE TEVVDTGNDH VFGYFRNHDE YTVLILANFS
DFTQHLEARR LRMLGLRKTE VDLFAGKTVT ATRELSLEPY AFMVLARPGK
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