| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0208 |
|---|
| Symbol | |
|---|
| ID | 3706243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 230782 |
|---|
| End bp | 232821 |
|---|
| Gene Length | 2040 bp |
|---|
| Protein Length | 679 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637736724 |
|---|
| Product | oligopeptidase A |
|---|
| Protein accession | YP_342268 |
|---|
| Protein GI | 77163743 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATC CACTTCTTGA ATTTGCGGGC CTACCTCCAT TTTCGAAAAT TCAGCCAGCC
CATGTGGAGC CTGCGATTGA TTGTCTGCTG GCAGAAGGGC GGGCCTTGAT TGAACAACTG
CTTACTCGCC ATACTGTCTA CACTTGGGAT AATCTAGCTC AGCCGCTAGA AGACTTGCGG
GAGCATCTTG ACCGAGTGTG GTCTCCTGTG TCCCATATGA ATGCGGTGGT TAATAGCGAT
GGATTACGGC GGGCTTACAA TGCCTGTTTG CCTAAACTTA GCGAGTTTGC CACTGAACTC
GGGCAAAACG AAAACTTGTA CCGGGCCTTT CAATCGATTG CTGAAGGCGA CGAGTATCCG
AGCCTGAATG TTCCCCAGAA AAAAATTATT GTCAATGCCC TGCGCGATTT TCGGCTTTCA
GGAGTGACTC TGCCATCGGA AAAGAAAGCT CGCTTTAAAG CCATCCAGCA GCAGTTAGCC
AGTTTAAACG CCAAATTTGA GGAAAATCTG CTGGATTCGA CCCAAGCTTG GCGTAAGCAC
CTTGCGGATG AGACAATCCT GGCGGGACTA CCCGAGGGAG CACGGGCCCA AGCGCGCCAA
GCAGCGGAAC AAGCGGGCCT GGAGGGTTGG TTGTTGACCT TGGAAGCACC TTCCTATGTT
GCGGTCACGA CCTACGCCGA TGACCGGGAA CTACGGGAAG AAATTTACAC CGCCTTTGTC
ACTCGCGGTT CGGATCAGGG CCCCCATGGA GGGCGCTGGG ATAATACTCA AGTCATGGAG
GAAATCTTGG CCTTGCGCCA TGAAGCGGCA CAGTTGCTTG GTTTTGCCAA TCATGCTGAA
TGCTCCCTAG CTACCAAAAT GGCCGGAAAT CCGCAGCAAG TATTAGATTT TCTTAATGAT
CTAGCCGTCC GCTCCAAACG AGTGGCCGAG CAGGATTTAG CTGAGGTCCG ATCCTTTGCC
CAGGCACACT ATGGTATTGA GGATCTCCAG GCGTGGGATG TGGCGTATTA TGGAGAAAAA
TTGCGGCAGC ACAAATATGC CATTTCCCAG GAGGAACTCA AGCCTTATTT CCCCGTCTGG
CGGGTGCTGG AAGGGCTATT TACTATCGTG AATCGACTCT ATGGCCTGGA AATTCAGGAA
CGAAAGGATG TGGATACTTG GCATCCCCAG GTGCGTTTTT TCGATATTTT CGATGACAGT
GGCGAACTGC GCGGGCAGTT CTATCTGGAT CTCTATGCGC GCAGCAACAA GCGAGGGGGA
GCATGGATGG CCGATTGTCT GTCCCGCAAG CGCCAGGGAA GTCAATTACA AATTCCAGTG
GCCTATTTGA CTTGTAACTT GACACCACCG GTAGATGATA AGCCAGCCCT GTTCACCCAT
AATGAGGTGA TCACGTTGTT TCACGAGTTT GGCCACGGTT TACATCACTT GCTCACCAAA
ATTGATTATC CCAGCGTGGC GGGAATTAGC GGTGTGTTCT GGGATGCAGT GGAATTGCCT
AGCCAGTTTA TGGAGAATTG GTGCTGGCAA CAAGAAGCGT TGGCCCTCAT TGCCTGCCAT
TTTGAAACCC ACGAACCTCT CCCGGAAAAA TTATTTGAGC GCATGCTAGC GGCCAAGAAT
TTCCTCTCGG GGATGATGAT AGTGCGCCAG CTTGAGTTTG CCTTGTTCGA TTTTCGCCTG
CACTTGGAGT ATGACCCCGC GAAGGGCGCC CGGGTTGATG AGCTGCTGCA GGAGGCGCGA
GAGCAGGTTG CCGTTGTCAA GCCGCCGTCC TTTAACCGTT TCGCCCATAG CTTCAGTCAT
ATCTTCGCCG GTGGTTATGC CGCTGGTTAC TATAGTTACA AGTGGGCCGA GGTGCTATCA
GCAGATGCCT TTTCCCGGTT TGAGGAAGAA GGTATTTTTG ATCGGCAGGC AGGCAGGGCT
TTCATGAGCA GCATCTTGGA GCAGGGAGGC AGCCGTGATC CCCTGGAACT ATTTATCGAA
TTTCGGGGCC GAGAGCCCGT CATTGACGCC TTGCTCCGCC ACAGTGGCAT TGCCGCCTGA
|
|---|
| Protein sequence | MSNPLLEFAG LPPFSKIQPA HVEPAIDCLL AEGRALIEQL LTRHTVYTWD NLAQPLEDLR
EHLDRVWSPV SHMNAVVNSD GLRRAYNACL PKLSEFATEL GQNENLYRAF QSIAEGDEYP
SLNVPQKKII VNALRDFRLS GVTLPSEKKA RFKAIQQQLA SLNAKFEENL LDSTQAWRKH
LADETILAGL PEGARAQARQ AAEQAGLEGW LLTLEAPSYV AVTTYADDRE LREEIYTAFV
TRGSDQGPHG GRWDNTQVME EILALRHEAA QLLGFANHAE CSLATKMAGN PQQVLDFLND
LAVRSKRVAE QDLAEVRSFA QAHYGIEDLQ AWDVAYYGEK LRQHKYAISQ EELKPYFPVW
RVLEGLFTIV NRLYGLEIQE RKDVDTWHPQ VRFFDIFDDS GELRGQFYLD LYARSNKRGG
AWMADCLSRK RQGSQLQIPV AYLTCNLTPP VDDKPALFTH NEVITLFHEF GHGLHHLLTK
IDYPSVAGIS GVFWDAVELP SQFMENWCWQ QEALALIACH FETHEPLPEK LFERMLAAKN
FLSGMMIVRQ LEFALFDFRL HLEYDPAKGA RVDELLQEAR EQVAVVKPPS FNRFAHSFSH
IFAGGYAAGY YSYKWAEVLS ADAFSRFEEE GIFDRQAGRA FMSSILEQGG SRDPLELFIE
FRGREPVIDA LLRHSGIAA
|
|---|
| |