Gene Noc_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0181 
Symbol 
ID3706214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp201338 
End bp201679 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content51% 
IMG OID637736698 
Productintegration host factor, beta subunit 
Protein accessionYP_342244 
Protein GI77163719 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000858176 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCCCG AGCTTGTTGT GGTGTGCGGC TTTGGGAGTG CGTTGTTTGT TATGACCAAA 
TCGGAATTGA TAGAAAGGCT TGCCCAGCGT CAGGCGCTGC TGTCTTATCG CGATGTAGAG
CTAGCAGTCA AAATGCTGCT AGAGGTGATG AGCCAGGCTT TAGCACAAGG TGAGCGTATC
GAGATACGAG GGTTTGGGAG TTTTTCATTG CATTATCGCC CACCGCGGAG CGGACGCAAC
CCAAAGACGG GTGATGCCGT GCCATTGTCC TCTAAATATG TTCCACACTT CAAGCCTGGT
AAAGAGCTGA GAGAACGAGT TGATCGTGGC GAATCTATTT AG
 
Protein sequence
MAPELVVVCG FGSALFVMTK SELIERLAQR QALLSYRDVE LAVKMLLEVM SQALAQGERI 
EIRGFGSFSL HYRPPRSGRN PKTGDAVPLS SKYVPHFKPG KELRERVDRG ESI