Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0181 |
Symbol | |
ID | 3706214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 201338 |
End bp | 201679 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637736698 |
Product | integration host factor, beta subunit |
Protein accession | YP_342244 |
Protein GI | 77163719 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000858176 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCCCCG AGCTTGTTGT GGTGTGCGGC TTTGGGAGTG CGTTGTTTGT TATGACCAAA TCGGAATTGA TAGAAAGGCT TGCCCAGCGT CAGGCGCTGC TGTCTTATCG CGATGTAGAG CTAGCAGTCA AAATGCTGCT AGAGGTGATG AGCCAGGCTT TAGCACAAGG TGAGCGTATC GAGATACGAG GGTTTGGGAG TTTTTCATTG CATTATCGCC CACCGCGGAG CGGACGCAAC CCAAAGACGG GTGATGCCGT GCCATTGTCC TCTAAATATG TTCCACACTT CAAGCCTGGT AAAGAGCTGA GAGAACGAGT TGATCGTGGC GAATCTATTT AG
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Protein sequence | MAPELVVVCG FGSALFVMTK SELIERLAQR QALLSYRDVE LAVKMLLEVM SQALAQGERI EIRGFGSFSL HYRPPRSGRN PKTGDAVPLS SKYVPHFKPG KELRERVDRG ESI
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