Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0179 |
Symbol | |
ID | 3706212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 198813 |
End bp | 199496 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637736696 |
Product | cytidylate kinase |
Protein accession | YP_342242 |
Protein GI | 77163717 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000847233 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAG AAATCCCCGT GATTACGGTG GATGGGCCTA GTGGTTCAGG GAAAGGCACC TTAGCACAGC AGTTGGCACA GCACTTGGAA TGGCACTACT TAGACAGTGG TGCGATGTAT CGGGTATTGG CTCTGGCAGC GGATAAACAT GGCATTGCGC CAAATGCTCC TAAGCAGTTA GAAACTTTGG CCCAGAATCT AGATGTCCGA TTTATATCGG GTCTAGAGGG CATGCCAGCA CGAGTGTTTC TAGAGGGCTC AGAAGTGAGT GATTCTATCC GTAGAGAAGA ATGTGGTAAT GCTGCTTCAA AGATTGCTGC TTTGGCTGAG GTACGGGGGG CCTTGTTGAT GCGACAGCGG GCTTTTCGCA AAGCACCAGG ATTAGTTACT GATGGGCGAG ATATGGGAAC AGTGGTGTTT CCAGAGGCGG ACTTAAAAAT TTTTCTTACT GCCAGTCCAT ATGAGCGGGC GCGAAGGCGT TATAAGCAGT TGAAGGAAAA AGGCATAGGT GCTAATCTAA AAAATTTAGA GAAAGAAATC GCTGAACGGG ATAGGCGCGA TTGCGAACGT AATATTGCTC CGCTCAAATC GGCTGATGAT GCTATAATAC TAGATTCTAC AAACCTTGCT ATTAAGGAAG TATTTCAGCA AGTGTTACCA TGGTTGTCAG GAAAAAATAC GTAA
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Protein sequence | MSKEIPVITV DGPSGSGKGT LAQQLAQHLE WHYLDSGAMY RVLALAADKH GIAPNAPKQL ETLAQNLDVR FISGLEGMPA RVFLEGSEVS DSIRREECGN AASKIAALAE VRGALLMRQR AFRKAPGLVT DGRDMGTVVF PEADLKIFLT ASPYERARRR YKQLKEKGIG ANLKNLEKEI AERDRRDCER NIAPLKSADD AIILDSTNLA IKEVFQQVLP WLSGKNT
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