| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0140 |
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| Symbol | ruvB |
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| ID | 3706172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 152065 |
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| End bp | 153111 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637736656 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_342203 |
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| Protein GI | 77163678 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTAA ACCGAGATAT GGTTTCCCCC CAAGAAGATC GTGGGGAAAA AGCAGTTGAA
TTTTCGCTAC GTCCTGCCAG ATTAGCCGAT TATGTAGGAC AACCCCAGGT GCAAGAGCAG
ATGGAGGTTT TTATTCCTGC TGCCCGGGCC CGGCATGAGG CCCTTGACCA CGTACTTATT
TTTGGCCCCC CAGGGCTGGG TAAGACCACT CTCTCCCATA TTATTGCCAA TGAGTTGGAA
GTGAATCTGC GGCAAACTTC TGGACCGGTA CTGGAACGGC CTGGCGATCT GGCTGCTTTG
CTTACCAATC TGGAGCCTCG GGATGTACTT TTTATCGATG AAATTCATCG CTTAAGCCCA
GTGGTGGAGG AAGTGCTTTA TCCGGCCATG GAGGATCGTC AGATTGATAT TATGATTGGT
GAGGGTCCGG CGGCGCGATC CATCAAACTG GATTTGGTGC CTTTTACCTT GGTGGGGGCG
ACCACCCGGG CAGGATTGTT GACTTCTCCT CTGCGGGATC GCTTTGGTAT CGTGCAACGC
CTAGAATTTT ATGCGGTAGA TCATTTAGTT TTGATTGTGG AACGTACGGC CCGTATTCTT
GGCATGGCGA TGGAAAAAGA GGGCGCCTTG GAGATTGCGC GCCGTTCCCG CGGAACGCCG
CGAATTGCTA ACCGCCTGCT GCGGCGAGTG CGGGATTATG CCGAAATCAA GGGAGATGGC
CAGGTAACCC GCCAGGTAGC GCAAAAGGCC CTGGATTTGC TAGACGTGGA TAGCCATGGT
TTTGATACCA TGGACCGCAA GTTGCTGTTA GCGATGCTTG AGAAATTCGA TGGCGGGCCG
GTGGGTGTCG ATAGTCTAGC AGCCGCCATT GGCGAAGAGC GGGGTACTAT TGAAGATGTC
ATAGAGCCAT TTTTACTTCA GCAGGGATTC GTTATGCGTA CGCCGCGAGG CCGAATGGCA
ACCCGCCATG CCTATCTTCA TTTTGGTTTA AAACCGGCTG TAAAGATGGT GCCACAAGAA
GTTTCTGATC TTTTTCCCAA TGAATGA
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| Protein sequence | MTLNRDMVSP QEDRGEKAVE FSLRPARLAD YVGQPQVQEQ MEVFIPAARA RHEALDHVLI
FGPPGLGKTT LSHIIANELE VNLRQTSGPV LERPGDLAAL LTNLEPRDVL FIDEIHRLSP
VVEEVLYPAM EDRQIDIMIG EGPAARSIKL DLVPFTLVGA TTRAGLLTSP LRDRFGIVQR
LEFYAVDHLV LIVERTARIL GMAMEKEGAL EIARRSRGTP RIANRLLRRV RDYAEIKGDG
QVTRQVAQKA LDLLDVDSHG FDTMDRKLLL AMLEKFDGGP VGVDSLAAAI GEERGTIEDV
IEPFLLQQGF VMRTPRGRMA TRHAYLHFGL KPAVKMVPQE VSDLFPNE
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