| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0137 |
|---|
| Symbol | |
|---|
| ID | 3706169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 150092 |
|---|
| End bp | 150838 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637736653 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_342200 |
|---|
| Protein GI | 77163675 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.153689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGAC ATAGTAAATG GGCCAATATT CAATATCGTA AGGGCGCCCA GGATGCCAAG
CGGGGTAAGC TTTTTACCCG GCTTATTCGC GAGATTACGG TGGCGGCTCG CCTTGAGGGC
GGCGATCCCG CAACAAGTCC AAGGCTGCGC ACCGCTATTG ACAAGGCTTT CGCTGCTAAT
ATGCCGAAAG ATAACATTGA GCGGGCTATC AAACGAGGCA CCGGCGATCT GGAAGGAGTG
GCCTACGAGG AGGTCCGCTA TGAAGGATAC GGACCCTATG GCGTAGCCGT GATGGTGGAC
TGTATGACCG ATAATCGTAA CCGCACCGTG GCTGAAATCC GCCACGTTTT TAGTAAATGG
GGCGGAAATC TGGGCACGGA TGGATCGGTT GCCTATTTAT TCAGCAAAAA AGGAATTATC
AGCTATTCTA AGGAAAGCAA CGAAGATGCC ATCATGGAAG TAGCCATTGA AGGGGGCGCT
GAGGATGTGG TGACTAACGA GGATAGCTCA ATAGATGTGT TCACTGAACC GGAGGAGTTT
TCGACGGTAA AGAAGGCTCT GGATGAGGCG GGTTTGAAAG CCGAGCAGGC AGAAATTACG
CAGCATGCGT CGACCAGCGT CTCATTGGCG CTGGAGGAAG CACGGAAAAT GCTGGATTTT
CTGGATGCTC TGGAGGAGCT GGATGACGTT CAGCAGGTCT ATAGCAATGC TGATTTCTCC
GAGGAAATTC TAGCGCAATT AGGATAG
|
|---|
| Protein sequence | MAGHSKWANI QYRKGAQDAK RGKLFTRLIR EITVAARLEG GDPATSPRLR TAIDKAFAAN
MPKDNIERAI KRGTGDLEGV AYEEVRYEGY GPYGVAVMVD CMTDNRNRTV AEIRHVFSKW
GGNLGTDGSV AYLFSKKGII SYSKESNEDA IMEVAIEGGA EDVVTNEDSS IDVFTEPEEF
STVKKALDEA GLKAEQAEIT QHASTSVSLA LEEARKMLDF LDALEELDDV QQVYSNADFS
EEILAQLG
|
|---|
| |