Gene Noc_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0129 
Symbol 
ID3706161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp141069 
End bp141605 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content43% 
IMG OID637736645 
ProductCheW-like protein 
Protein accessionYP_342192 
Protein GI77163667 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAGA ACAACCCTTT TTCCATACTT CGCAATATCG AAGCTCAAAA CCGTCAGCAT 
GGGGCTGCTT TACCACAGCA AACCGCTATC CGTCAGGTAT GGACGAATCT TGGTTTTCTT
CTTGGTAACC AAAAGCTAGC TGCTCTACTT ACTCAAGTAT ATGAGGTTTT TCCTTGTCCT
GCGATAACCA GAGTTCCTGG CGCTAAGCCT TGGGTAGTGG GAGTAGCAAA TATCCGCGGC
TATATATTGC CCCTTATAGA TCTGCATGCC TATATCTATG GTGCTCCATC ACAGCGGACT
CATAGAAGCA AAGTTTTAGT TGTCACCAAG GAAAAATTTC TTATAGGTTT GTTGGTAGAA
GAAGTTTTCG GACTCAAGCA TTTTTTAGAC GAAGAATGGA CTGGGCAGAA TCTTCCATCG
CATGATCCTC TTACTCGCTA TATTCAAAGA GGATTTGCTC AGAACAGAGA AATATGGCTG
GAATTTGATT TTCATCTGCT TATGGAACAA GAGAGTTTTT TCCTAGCAAC CACCTAG
 
Protein sequence
MDKNNPFSIL RNIEAQNRQH GAALPQQTAI RQVWTNLGFL LGNQKLAALL TQVYEVFPCP 
AITRVPGAKP WVVGVANIRG YILPLIDLHA YIYGAPSQRT HRSKVLVVTK EKFLIGLLVE
EVFGLKHFLD EEWTGQNLPS HDPLTRYIQR GFAQNREIWL EFDFHLLMEQ ESFFLATT