| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0126 |
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| Symbol | |
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| ID | 3706158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 133209 |
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| End bp | 138485 |
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| Gene Length | 5277 bp |
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| Protein Length | 1758 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637736642 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_342189 |
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| Protein GI | 77163664 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAA ATTATGAGTT CAGTGAAAAC GCGCTCAGCT GGGTTAAGAA TGAGCTTGAA
GAATCATTGC GTGAGGCAAG TCTAGCTTTA GAAGCCTTTG CCGAAAACAC AGATGATATC
ACCCAATTAC GCTTCTACCT AAACCATTTA CATCAGGTAG AAGGAGTTCT TGAAATGGTG
GAATTATCAG GGGCAAATCT GCTTGCGTCT GAGACCAAAG CGCTAGCTCT TGGTATTCTT
GAGAAAGAAA TAGAATCTAA TTCTCAAGCT CTAGAAATAT TAATGCAAGG TACGCTTTCT
CTTCAGGATT ATCTAAATCG CCTACATTCA GGAAAGAAGG ATCATCCTGT TAGTGTCTTG
CCTATGGTAA ATGAGATACG TCAAACCTAT AACAAGTGCC CACTAAAAAA AATAGATTTC
TTTGAGCCGG AATTAAACAC TCCGCTCCCA AACACCTTGG CATCTCCCTT AGAGATGGAT
AGTAACGTTT CTCCCTTATT TTCTTCCAAA TTACGTCTTC AATACGAGTC GGCTCTCCTC
AATTGGTTCC GAAATTCATC CAGTGATAGT CTTTTACACC TAGCTAAGGT CATGTCTGAA
TTACGGCAAA GCTGCCGTGA TATTGCTGCT ATTCGCCTAT GGTGGTTATC TCAAGGAGTT
ATTGAAGCGC TGCAAGAAGA TGGAATTCAA TCAACCCAAG AAATAAAACT TTTATTAGGA
GGATTGAATA AGAAAGTTAA AATATTGATT CAATCAGGCG AGTCCGCATT AGTAGACGAT
ATAACTGACA GCCTGCTTAA ATCACTATTA TTCCAAGTTG CTAATGCTAC CTCTTCTGGA
AGCTATGTTT CTGCCATAAA AGAAACTTAT CAATTAGAAA ATTATTTTTC TTCTTCAGAC
CAGTCCTTAT TAAGCAATCT AGGAGCCGAA GTCGTTGATA CGGTATTTGA TGCTCTTCAA
GAAGATCTTA CTCAGGCTAA AGATCTCCTA GAGATTTCTG AACGCGCTAA TGGAATATCA
AAGGAAGGAA TTGAAAATCT AGATCGCCTG TTTCACAAGA TGGCTGATAC CTTAGAAGTA
CTTGGCTTTG ATACCTCTAT TTTCATTCTG CATGAAGCAA TCAGGAAGCT ACATGCTATT
AGTCAAAAAG AAACTGGATC TGACAGCAAT CAACAGCTAG ATTTGGCTGA TAATCTGCTC
CAAATTGAGG CATCACTTAA AAAAGAAATA GCGTTATCAA AAAACCCAAA AAAATCATCT
CCTGCCACTG GTAGCCATTC CGATATTCGC CAAACGACAT CTTCAGCTCC TACTTCTGAT
GATAATGTCA AAGCGGCGCT GCATACGGCA GCAAAAGAAT GCCTCGCTGA ACTTATGACT
GTAAGTGAGG CACTAACTAG CTATAGTCTG AATCTAAACG ACTCAAACGC ACTGAATTCT
GTTCCGAATA AATTACGACA AATCTCAGAG ATTTTGTCGG TGCTGGAATT AACCCGTATT
GCCGATTTAA TCGCAGAGTG TAATATTTTC ATTAATAAAG CTCTTATCGG AAAAATATAT
AAGTCCTACC CCGCCGGCCT GGAGGAACTA GCAGAAGCCA TTTGCGCTAT AGAACTCTAT
CTAGAGATGC TAGCGGAAGG CGCGTTAGCG AGCAGCTCAC TTTTAGACAC TGCAGCGGAA
TGCCTGACCC GTGTTCCAAC ACCTTTAGAT AATGCGATTA ATAATTACCA AGCTAATGTC
GAATCTATGG GTGCTGAATC TGCCCCCGAA GAATTATCTT TAGGAGTTAC TGAAGAAAAC
TCTGTCTCAG AAGTAAAAAG CGACCTAATT CCATTCTCTA GAACCACTTG GGAAATTCCT
GGCGCACCAG TTTATCCAAA AGATGTCGAC CCAGAAATTG CCACCTATTT TATTGAAGAA
GCCCAAGAAG AGATGCTTTC CATCGCTAAG CATTTTTCTC AATGGCGGCA GGATAGCAGC
CAACAGGAAG CGCTTAAAAC GATACGCCGC TCCTTTCATA CCCTCAAAGG CAGTGGGCGC
CTCGTCGGTG CAATCGATAT CGGCGAGCTA GCCTGGGCTA TTGAAAATAT GCTTAACCGT
ATTATGGAGG GAACAATTGA AATCAAGCCT GCGGTATTTG AAATAATTGA AGGAGCACAG
CAAGCATTAC CACAGCTTCT TACCTTGTTC ACGCAGGGGG GAGGGAGACC AGCCGAGAGT
ATTTTGGCAT TATTACAAAG GGCGCAGGCC GTAGCTGACA ATACGCCCAA TCTTGCTTCC
AGTGAGGTTG ACTCCACCCT CCAGGCTGTT GAAGTAGAGG ATTCCTACTC CCCCCCTGCT
AAAAACAGCG AGTCCTCCAC CGGGGAGAAA AATTCTAAGC ATGATCCAGA ACTTACCCAG
GAAGCACAGC TAGCAGAACA AGGAAAATTC ATTTCAGGCC AGCATACTTC TGTTTCTGGA
CATCTTTCGG ATCCAGAATT ACTAGCCGTT TTCCTCGATG AAGCGGATGA CGTCCTGCAA
GCTATAGAGA CTACGCTAAC CGACCTACGC GCATCTCCTC AAGAAAGCAC ACCGGTACAA
CAACTACAAC GAGAGCTTCA TACCCTAAAA GGGGGCGCAC GCCTGGCTAA CCTTACCGCT
CTGGGCGATC TTAGCCATGA TCTGGAATCT CTTATTATCA CTGCTATTGA TAAGGGCTTT
ACAGATAACA GTGAATTCCT CAATCTCTTA CAAGAAGGAC ATGATCGACT TGCAGAAATG
TGCGACTCCC TTCGCCATGG AGCTGCTTTA CTCGCTGCTA ATGATTTATC CTCCCGTATT
CATGGAATGG CTGAATCTTT ACCATATACG GAAAAAATGC TGCCGATGCC AGATGAGCTC
TCTCAGGATG ATACCCCTGA TCCTGTTTCA AAGGCTCCCT CCATCGATCC CAATAACGAA
CTGGTTGCTG CTTTCCTAGA GGAAGCCGAT GAGCTGCTGC AGGCTAGCCA GATAAGCCTT
TCAGCCTGGC AGAAAAACTT CTCCTCAGAA CAAGCTCCGG CTGAGGAATT TCAACGGCAT
CTGCATACCT TAAAAGGTGG CGCGCGGCTA GCAGGGATTA CCCTGTTGGC TGACCTAGCC
CATCATATGG AAACAATAGC AAGCACGATA ATAGAGGGAA AACAAAATAC GGAATCAGGG
CTATTTGGGC TTTTGCAGCA TTGTCTTGAT AGATTATGTA CATTATGCGA GTTTGCTCAA
AACGCTGTCC CACTCCCTTC CATATCAGAT TTATTGATTG AAATAAGTCG TTACAATTCT
GAGGATCTAC CATCCTCTCA GAAATCGGAA CAAGCGCGGT TAATTCACGA TCAAGAACTG
CCAGCAGCAA CACTAGCTCT TCCCCCCGAA CAGAAGCTGC ATAAAACCGC GCGCCCTCTT
GCAGAAACCG GAACCCCTCC AGTAGAACAA ATACGGGTAC GGGCCGATTT GCTGGATCAT
CTAGTGAACA ATGCTGCTGA AGTTAATATC TTTAGCACTC GCCTCGAACA ACAGATTGGG
ACAATACGTT TAAACCTTGG CGAAATGGAA CGAACTGTTG CCCGCCTGCG GAGTCAAATT
CGCAGGTTAG AGATCGAGAC AGAGACCCAA ATCATTTATC GCCATGAAGA AGCAAATAAC
CAACATCTGG AAGGCTTTGA TCCCTTGGAA ATGGATCGCT ACTCTCAATT ACACCAATTG
TCACGGGGAC TCGTGGAAAG TATCAGCGAT CTCACTAATA TTAAAGAAAC GCTAGATGGG
ACAGCACGGG AAGCGGATAT CCTCTTACTC CAGCAATCAC GTACTGGGGC TGACCTGCAA
CAGGGCTTAA TGAATACACG GATGCTACCG TTTACGGGAG TAACACCGCG CCTTCATAGA
ATCGTTCGCC AAACAGCCCA GGAACTCGAT AAAAAAGTCC AGATAAAAAT AACGGATAGC
GGTCATGAAT TAGACCGTAC AGTATTAAAT CGTATTATGG CTCCCCTTGA GCATATGTTA
CGAAATAGTA TCGCTCATGG TATTGAAAAA GCCCCTCTCC GTATTGCAGC TGGCAAGAAA
GAAATGGGTA GTATTTCCCT CTCACTAACC CGTGAAGGCT CGGAGATTGT CATCCACGTA
AGCGATGACG GACAAGGCAT TGATTTGGAG AAAATACGCG CTAAAGCACT TACTCGAGGA
TTGGTGCAGA AAGAGGCGAT GCCGCCCGAC GCTGATCTAA TCCAGCTCAT CCTGGAATCG
GGTTTCAGTA CTGCTAATAA CGTTTCCCAA GTTGCGGGGC GTGGGATAGG TATGGATGTT
GTCAATAGCG AAATACAAGC CCTCAACGGA ACCTTAGCTA TCGCCTCTCA AAAAGGTAAG
GGAACAACCT TTACCATCCG CCTTCCACTG ACTTTTACTA TTGTCCAGGC CCTGTTAGTC
GAAACGAAGA ATGAACTTTT CGCTTTGCCT ATCATTAGCG TACAAAGTGT AATCCGTCTT
GATAAGGAAA CCGTTGATTC CCTCCTTGCT AGCGAACAAT GCCTATTTTG TCATGAAAAC
GTTAATTATC GCTTTATTGA TCTTGGCGCC GCCTTGGGAC AAGATTACCC AGAAACATCC
ACCTCTAACA CCCATTACCC TGTATTATTA GTGCGTTCGG GCGAATTTCA GGCCGCCATA
CTAGTAGATG CTTTAATAGG CAGCCGTGAA ATCGTCATTA AATCAGTGGG ACCCCAGCTC
GGCGCTATCA AAGAGATAGC CGGCGCAACT ATTCTAGGGG ATGGCAGAGT AGTGCTTATC
CTGGATCTGC CAGCACTGAT CCGTAAGGCC ACACAAAAAA CAGAAACCTC TATAGCGATA
AAGCGGCAGG CAAATACCAA GATAGCGCAA AAACCAGCGG TCATGGTCAT CGATGATTCT
ATTACTATTC GCAAAACTAC CGAGAAAATT CTGGAACGCC ATGGAATGGA AGTACTGACA
GCCCGGGATG GGGTAAATGC AGTAGAACTG CTTCAGGAAT ACACCCCCGA TATTTTCCTG
CTAGATATTG AAATGCCGCG GATGGATGGC TTTGAGCTCG CTGCTTTTAT ACGAAAAGAT
AAACGATTGC GGGGTATTCC AATCATCATG ATTACCTCCC GGAGCGGGAA AAAACACCGG
GATAAAGCTG ACCAAATAGG CATTAACGCC TATTTAATTA AACCCTATCA AGAGGACGAA
TTATTACAAC ATATTCAACT TTTTTTAAAC GCGACTGAGG CCAATGTTAC CCTCTAA
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| Protein sequence | MSTNYEFSEN ALSWVKNELE ESLREASLAL EAFAENTDDI TQLRFYLNHL HQVEGVLEMV
ELSGANLLAS ETKALALGIL EKEIESNSQA LEILMQGTLS LQDYLNRLHS GKKDHPVSVL
PMVNEIRQTY NKCPLKKIDF FEPELNTPLP NTLASPLEMD SNVSPLFSSK LRLQYESALL
NWFRNSSSDS LLHLAKVMSE LRQSCRDIAA IRLWWLSQGV IEALQEDGIQ STQEIKLLLG
GLNKKVKILI QSGESALVDD ITDSLLKSLL FQVANATSSG SYVSAIKETY QLENYFSSSD
QSLLSNLGAE VVDTVFDALQ EDLTQAKDLL EISERANGIS KEGIENLDRL FHKMADTLEV
LGFDTSIFIL HEAIRKLHAI SQKETGSDSN QQLDLADNLL QIEASLKKEI ALSKNPKKSS
PATGSHSDIR QTTSSAPTSD DNVKAALHTA AKECLAELMT VSEALTSYSL NLNDSNALNS
VPNKLRQISE ILSVLELTRI ADLIAECNIF INKALIGKIY KSYPAGLEEL AEAICAIELY
LEMLAEGALA SSSLLDTAAE CLTRVPTPLD NAINNYQANV ESMGAESAPE ELSLGVTEEN
SVSEVKSDLI PFSRTTWEIP GAPVYPKDVD PEIATYFIEE AQEEMLSIAK HFSQWRQDSS
QQEALKTIRR SFHTLKGSGR LVGAIDIGEL AWAIENMLNR IMEGTIEIKP AVFEIIEGAQ
QALPQLLTLF TQGGGRPAES ILALLQRAQA VADNTPNLAS SEVDSTLQAV EVEDSYSPPA
KNSESSTGEK NSKHDPELTQ EAQLAEQGKF ISGQHTSVSG HLSDPELLAV FLDEADDVLQ
AIETTLTDLR ASPQESTPVQ QLQRELHTLK GGARLANLTA LGDLSHDLES LIITAIDKGF
TDNSEFLNLL QEGHDRLAEM CDSLRHGAAL LAANDLSSRI HGMAESLPYT EKMLPMPDEL
SQDDTPDPVS KAPSIDPNNE LVAAFLEEAD ELLQASQISL SAWQKNFSSE QAPAEEFQRH
LHTLKGGARL AGITLLADLA HHMETIASTI IEGKQNTESG LFGLLQHCLD RLCTLCEFAQ
NAVPLPSISD LLIEISRYNS EDLPSSQKSE QARLIHDQEL PAATLALPPE QKLHKTARPL
AETGTPPVEQ IRVRADLLDH LVNNAAEVNI FSTRLEQQIG TIRLNLGEME RTVARLRSQI
RRLEIETETQ IIYRHEEANN QHLEGFDPLE MDRYSQLHQL SRGLVESISD LTNIKETLDG
TAREADILLL QQSRTGADLQ QGLMNTRMLP FTGVTPRLHR IVRQTAQELD KKVQIKITDS
GHELDRTVLN RIMAPLEHML RNSIAHGIEK APLRIAAGKK EMGSISLSLT REGSEIVIHV
SDDGQGIDLE KIRAKALTRG LVQKEAMPPD ADLIQLILES GFSTANNVSQ VAGRGIGMDV
VNSEIQALNG TLAIASQKGK GTTFTIRLPL TFTIVQALLV ETKNELFALP IISVQSVIRL
DKETVDSLLA SEQCLFCHEN VNYRFIDLGA ALGQDYPETS TSNTHYPVLL VRSGEFQAAI
LVDALIGSRE IVIKSVGPQL GAIKEIAGAT ILGDGRVVLI LDLPALIRKA TQKTETSIAI
KRQANTKIAQ KPAVMVIDDS ITIRKTTEKI LERHGMEVLT ARDGVNAVEL LQEYTPDIFL
LDIEMPRMDG FELAAFIRKD KRLRGIPIIM ITSRSGKKHR DKADQIGINA YLIKPYQEDE
LLQHIQLFLN ATEANVTL
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