Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0123 |
Symbol | |
ID | 3706155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 130896 |
End bp | 131627 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637736639 |
Product | hypothetical protein |
Protein accession | YP_342186 |
Protein GI | 77163661 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.138366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTGTTC CCCGTGTCTA TTTTCCCTTG TCCTTATCGA TAGGCTCTAG CGTATCCCTA GATGAGCGGG CTTTGCAGTA TGTAATCCGA GTGCTGCGCC TTAGGCTCGG CGCCCAATTG CGGTTATTTG ATGGCCGAGG TGCCGAGTAT CAGGCGGTGC TGGAGACAAT AGAGAAGCGG GCGGTTAAAG TACGGATTTT AGAACGTATC GAGCATCATG TTGAATCGCC TTTGCATATT ATTTTAGGGC AGGGGATCTC TCGGGGTGAG CGCATGGATT ATGCGCTGCA AAAGGCCGTG GAACTAGGGG TCAGTCGTAT CATCCCATTG CTTACTGAGC GTAGTGCTGT CAATTTATCT GCAGAGCGTG CCGAGAAACG GCTACGCCAT TGGCAGGGGG TTATTATCAG TGCTTGTGAG CAATGTGGCC GCAATTATAT CCCTCCGGTG GATACACCTC GGCCGCTAGC GGATTTTCTT AGGGACGACC ATAGGGGGCT GGCTGTGTTA TTGGATCCCC GGAGCAGGCG GCCATTGAAG GCGTTACCTT TGCCTTTGGA TAACCGGCTA ATAGTGTTGA TTGGTCCGGA AGGGGGATTG AATAAGGGAG AGGCTAAGCA GGCACAACAG GCTGATTTTA TTGGTGTCTG TCTTGGACCT CGTATTTTAC GGACCGAGAC GGCTACAGTA GCGGCGCTGA CGGCGCTGCA GCTACTCTGG GGAGACTTAT AA
|
Protein sequence | MRVPRVYFPL SLSIGSSVSL DERALQYVIR VLRLRLGAQL RLFDGRGAEY QAVLETIEKR AVKVRILERI EHHVESPLHI ILGQGISRGE RMDYALQKAV ELGVSRIIPL LTERSAVNLS AERAEKRLRH WQGVIISACE QCGRNYIPPV DTPRPLADFL RDDHRGLAVL LDPRSRRPLK ALPLPLDNRL IVLIGPEGGL NKGEAKQAQQ ADFIGVCLGP RILRTETATV AALTALQLLW GDL
|
| |