Gene Noc_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0087 
Symbol 
ID3705886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp90148 
End bp90867 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content40% 
IMG OID637736606 
Producthypothetical protein 
Protein accessionYP_342153 
Protein GI77163628 
COG category[S] Function unknown 
COG ID[COG2859] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAT CAAATAAAAG TAATGCGATC GTGCTTGGCG TTTGTCTAAT TATAGCCTTA 
TCCTCTCTCG GCTATCTTCT TGGTAATGCC GCTATTAGAT TTAAGGAGTA CGAGCGAACA
GTTACCGTAA AAGGACTATC GGAAAGGGAA TATAGTGCAG ATATCGTAAT CTGGCCCATC
CAGTTCAGTA CCGCAAGTAA TGATCTCGAA GAGATGTATA GATCCATAGA TGCAAGCACT
GAAAAGATAA AATCGTTTCT TGAAAGCGCT GGCGTTAATG CTGATGAAAT CTCATATTCA
TTGCCTGCGA TCACCGATAA GTCAGCGCAA CAGTATGGTA ATCAAGCTAA ATCTGAATTC
AGATATACCG CCTCCCAAAC AGTAACCGTT TATTCCAAAA ACATTAATGT GGTGCGAGAC
GTTATGGGAA ATATGTCTGA TTTAGGAAAG CGGGGAATTG TATTTACTGG CGGTGATTAT
CAATCACAAA CTGAATATAT TTTTACACGC CTAAATCAGG TGAAGCCTGA AATGATCGAA
GAGGCGACAA GGAAGGCCCG TGAAGTTGCA GAGAAATTTG CCGCCGATTC TAAAAGTACT
TTAGGAAAGA TTAAATCCGC CTCTCAAGGG CAATTTAGTA TTAGTGCCAG GGATAAGAAC
AATCCTCATA TTAAAAAAGT GAGGGTGGTT TCAACAGTTG CTTACTATCT TTCAGACTAA
 
Protein sequence
MTESNKSNAI VLGVCLIIAL SSLGYLLGNA AIRFKEYERT VTVKGLSERE YSADIVIWPI 
QFSTASNDLE EMYRSIDAST EKIKSFLESA GVNADEISYS LPAITDKSAQ QYGNQAKSEF
RYTASQTVTV YSKNINVVRD VMGNMSDLGK RGIVFTGGDY QSQTEYIFTR LNQVKPEMIE
EATRKAREVA EKFAADSKST LGKIKSASQG QFSISARDKN NPHIKKVRVV STVAYYLSD