Gene Noc_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0080 
Symbol 
ID3705879 
Type 
Is gene splicedNo 
Is pseudo geneYes 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp85910 
End bp86765 
Gene Length856 bp 
Protein Length 
Translation table 
GC content50% 
IMG OID639330280 
Product 
Protein accession 
Protein GI 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02249] integron integrase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAGAA TCAAATCGCC AACCTTGCTG GAAGATGTTC GCCGCATCAT GCGGCTCAAG 
CATTATTCGC TGCACACCGA GCGCTCTTAT TGCGAGCGGA TTAAAAATGC GTTGGTGTTT 
TTATACAAGC AGGTTCTGGA TATGCCGCTG ACCAAGCGTA TCGAGGCCAT TCGCTCCAAA 
ACCAGTCGGC GTGTGCCAGT AGTGTTGTCG TTGGACGAGA TCAGGCAAGT ATTGCCACGG 
GTTGAAGGCG TGGCGCAGTT AGTGGTGAAA CTGTTATACG GCAGCGGCTT ACGGATTAGC 
GAGGCCGTTC GGTTGCGGGT GCAGGATCTC GATTACGATT ATAAACAGAC TACCGTGCGC 
TCTGGTAAGG GCGATAAAGA CAGGGTAACC CCGCTTTCTG CGGCCATGAT ACCGTTACTG 
CAAAATCATT TTAGAAAAGG TCAAGGCGAT TCACGAGCAG GATTTGGCCG ACGGCTTCGG 
TGCAGTGTAT TTGCCGTATG CGCTGGCAAA AAAATATCCT CATGCCGAAC GGGAATGGGG 
CTGGCAATAT GTGTTTCCGG CCCGTTCGCT ATCGGTAGAT CCTCTGTCGG GTTTGACTCG 
ACGCCATCAT ATAGATCAAT CGCTGATTAA TAAGGCGATC AAGGCTGCGG TTCGACAAGC 
GGGTATTACT AAGCGAGTTT CTGCACATAC CTTTCGGCAC AGTTTTGCCA CGCATTTGCT 
GCAACGCGGC ATTGATATTC GAACGATTCA AGACTTGCTT GGACATCGTG ATTTAGAAAC 
GACGATGATT TATACCCATG TTTTAAATCA GGGCGGTCAT GGGGTGACAA GTCCATTGGA 
CGATTTGGAG GGATAG
 
Protein sequence