Gene Noc_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0049 
Symbol 
ID3705925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp47706 
End bp48230 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content47% 
IMG OID637736574 
ProductIS630 family transposase 
Protein accessionYP_342121 
Protein GI77163596 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.155938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGGT ACACGCAGCG CTGTAATATG AAAAGAAAGA GCTTTCTTCG TCTTCGTGAA 
CGCTATCGCC GCCGCGGCAA AAGATTTGTC TATCTTGATG AAAGCGGTTT TGAGCCGGAG
GTTTCCCGTC GTTACGCTTA CGCTCCAAAG GGGCGGCGTG TTTATGGTCT GATCTCCGGT
CATCGCAGAC CGCGAACCTC TTTATTGGCC GCCCGTATGG ATGAAGGCTT TGAAGCGCCG
TTTCTATTTG AGGGAACCTG TAACACGGCT GTGTTCAATG CATGGCTGGA AAAAGAGCTT
TGCCCCTTGC TCAACAGCAA CCACATTGTC ATCATGGATA ATGCTCCGTT CCACAAAGCC
GTTTCTTCAC GTGAAATCAT CAAAAAAACA GGGGCGGGAA TTTTATTCCT CCCCCCTTAT
TCCCCTGACT TTAACCCCAT AGAAAAAGAC TTCGGAAATA TCAAAAAAAT CAGAGAATAC
AACGAACACG AAACCCTTGA GAATATCGTT GCAGCGTATC AGTAA
 
Protein sequence
MTGYTQRCNM KRKSFLRLRE RYRRRGKRFV YLDESGFEPE VSRRYAYAPK GRRVYGLISG 
HRRPRTSLLA ARMDEGFEAP FLFEGTCNTA VFNAWLEKEL CPLLNSNHIV IMDNAPFHKA
VSSREIIKKT GAGILFLPPY SPDFNPIEKD FGNIKKIREY NEHETLENIV AAYQ