Gene Noc_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0043 
Symbol 
ID3705918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp40801 
End bp41271 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content51% 
IMG OID637736567 
Producthypothetical protein 
Protein accessionYP_342115 
Protein GI77163590 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.397691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGCTG ATGGGAGTCC ACTTAAGGCG CGTTTGCAGG AAGAAGTGAA GATTGCCATG 
CGAGCCAAGG ATAAGGCTCG GTTGGGAATT TTGCGGATGG TAATGGCGGC CCTCAAGCAA
TTTGAAGTGG ATACTCGCAA GCCTCTAGAT GATGCGCAAG TTATTGCGTT GCTGGATAAA
ATGCTGAAGC AACGGCGTGA GTCCTTGGCG CAATATGAGG CTGCGGGAAG GACGGATTTG
GCTGAAAAGG AGCGCTTTGA GGAAGAAGTG ATTCAGAGTT ATATGCCAAC GCCGCTTAGC
GAAGTTGAAG TCGAGCAGCT CATCGAAGAA GCGATCAGCC AGTGTCAGGC AACCACAGCC
AGGGATATGG GAAAAGTGAT GGCGCTACTT AAGCCAAATT TACAAGGCCG CGCCGATATG
GCGGTGGCCA GCGCCAAGGT TAAGGCGCGA TTAGAAGCAA TATCCAGTTA A
 
Protein sequence
MVADGSPLKA RLQEEVKIAM RAKDKARLGI LRMVMAALKQ FEVDTRKPLD DAQVIALLDK 
MLKQRRESLA QYEAAGRTDL AEKERFEEEV IQSYMPTPLS EVEVEQLIEE AISQCQATTA
RDMGKVMALL KPNLQGRADM AVASAKVKAR LEAISS