Gene Noc_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0038 
Symbol 
ID3705971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp37544 
End bp38032 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content49% 
IMG OID637736562 
Product7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
Protein accessionYP_342110 
Protein GI77163585 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCG CATATATCAG CATTGGCAGC AATATCAACC GAGAGAATAA TATTCGTGCT 
GGAGTCAATG CGCTGCGCTG CAGCTATGGA CCCCTTATCA TTTCACGGGT ATTTGAAAGC
GAGGCGGTGG GATTTCAAGG CGATAATTTT TACAATTTAG TCGTTGGATT CGATACAGAT
GAAGCGCCTC GAATTATCAC CCGTGCGCTC CACGAGATTG AACATGCCTG TGGCCGCAAA
CGCGACGGTC CCCGCTTTGG TCCACGGGCT CTCGATCTGG ATCTTCTGCT TTATGATAAC
TTAGTGATTG ATGAGCCGGG TCTCCAAGTA CCACGGGATG ATACACTTGA TTATGCCTTT
GTCCTACAAC CCCTTGCAGA AATTGCGCCC CACTTACCTC ACCCCGTGCT AAGCAAACGT
TATGCTGATC TCTGGGCTGC GTTCGATAAA CCTTTAAACC GTTTATGGCC AGTTGAGTTA
GAGCTATAA
 
Protein sequence
MARAYISIGS NINRENNIRA GVNALRCSYG PLIISRVFES EAVGFQGDNF YNLVVGFDTD 
EAPRIITRAL HEIEHACGRK RDGPRFGPRA LDLDLLLYDN LVIDEPGLQV PRDDTLDYAF
VLQPLAEIAP HLPHPVLSKR YADLWAAFDK PLNRLWPVEL EL