| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0037 |
|---|
| Symbol | |
|---|
| ID | 3705970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 36273 |
|---|
| End bp | 37454 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637736561 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_342109 |
|---|
| Protein GI | 77163584 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1565] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCG TTCAAAAAGA TTTTTTTCCC CACCCTGAGC CGATAGCCTT GGCTCATAGC
CAAAAATTGG AAAACGTGAT CCAAACGACC ATTGAGCAAG CAGGCGGCCA AATCCCCTTT
GCTCGCTTTA TGGAACTAGC GCTTTATACG CCGGGTTTAG GTTATTACAT GGCGGGTCTC
CATAAGCTAG GTACTTTCGG CGATTTTATT ACCGCTCCGG AGCTATCCCC TCTTTTTGCC
CGCTGCATCT CTCGCCAATG TCAGCAGATA TTTGAGCTGC TTGGAACAGG CGATATTTTA
GAATTTGGGG CTGGATCAGG CCGCCTAGCT GCGGATTTAC TTAGTGAACT AAACCTTAGC
GGTAATCTAC CGGAACGGTA TTTTATCTTG GAACTTAGTG CCGATTTGCG TCATCGCCAA
CAGGAAACAC TCTACCAGCG AGTACCCCTC CTCGCCTCAA GAGTAAGTTG GCTAGATCGA
CTACCCGACA GAATTGACGG CTTTATTCTA GCTAATGAGG TGTGCGATGC CATGCCTACG
CACTGCTTCC AGCTTGAAAA CGGGTACGAC TGGGAACGCT ACGTAGGCTA CGAGAAAGGC
AAGTTTGTCT GGAAAAAAGG CCCTTTAAGT CATCCCCTCC TGAAAGATCG CATTGCCAAA
ATACGCCTGC TTCTTAAACA TGTAAATAGC TACGAATCTG AAATTAATTT AGCTATGGAA
GGCTGGACTA CTGAAATCGC CCATCGATTG CGGAAGGGGA TGCTCCTCAT CATTGACTAT
GGCTTTCCTC GGCATGAGTA CTATCATCCA GAGCGAATGA TGGGCACTCT GATGTGCCAT
TATCGCCACC AGGCCCATCC CAATCCACTA ATCATGGCGG GGTTACAAGA TATCACTACC
CATGTGGATT TTACTGCTCT TGCCGAAGCA GGCCATAGTA GTGGGCTTAG GGTGGCCGGG
TATTGTACGC AAGCCGATTT CTTGCTGGCC TGCGGTTTGG ATAAACTAGC TGCGACCGAA
ATCGCAGCAG GGGAGAAGCA GGCTTTGGAA ACCAGCCAAC AGATCAAGCG CCTTGTTCTC
CCCAGCGAGA TGGGTGAACT TTTTAAGGCC CTCGCCCTAA CCCGGGAAAT TAACCAGCCC
CTATTAGGTT TTAATTTGCG GGATCGGCGG GCCCGCCTAT AA
|
|---|
| Protein sequence | MRRVQKDFFP HPEPIALAHS QKLENVIQTT IEQAGGQIPF ARFMELALYT PGLGYYMAGL
HKLGTFGDFI TAPELSPLFA RCISRQCQQI FELLGTGDIL EFGAGSGRLA ADLLSELNLS
GNLPERYFIL ELSADLRHRQ QETLYQRVPL LASRVSWLDR LPDRIDGFIL ANEVCDAMPT
HCFQLENGYD WERYVGYEKG KFVWKKGPLS HPLLKDRIAK IRLLLKHVNS YESEINLAME
GWTTEIAHRL RKGMLLIIDY GFPRHEYYHP ERMMGTLMCH YRHQAHPNPL IMAGLQDITT
HVDFTALAEA GHSSGLRVAG YCTQADFLLA CGLDKLAATE IAAGEKQALE TSQQIKRLVL
PSEMGELFKA LALTREINQP LLGFNLRDRR ARL
|
|---|
| |