Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0028 |
Symbol | |
ID | 3705961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 25794 |
End bp | 28004 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637736552 |
Product | primosome assembly protein PriA |
Protein accession | YP_342100 |
Protein GI | 77163575 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTAC CTCCTATCCT GCGTTTAGCT ATTCCTTCCC CCCTGCGACG CTACTTTGAT TATCTCCCGC CAGCTAAAAC TCCGTACCAA CAATTGCAAC CAGGTATACG TTTACAAGTT CCTTTTGGCA GACGCACCCT GATCGGTATC TTAGTAACAA TCGCATCTCA AAGCGAGATC GAAACCAGCA AATTGAGACG AGCTCAATAC TGCCTGGACA AAACCCCCGT CGTTCCCAAC TCTCTGCTCC AGCTTCTTAC TTGGGCCGCT AGTTATTACC ACCACTCCCC TGGAGAAGTC TTTTTTTCTG CTTTACCCCA ACTTCTACGC CAAGGAAAGC CCGCCACCTC TCCTATCTAT CGGCAATGGC TTTTAAGCTC TAAAGACTGC ACCACAGATG CGACGATTCT TAGCCGCGCA CCCCGGCAAC AGCAGCTTGT GGAATTATTA CGCTATCACC CAGAGGGCTT AACTTCATCC CAAATCAAGG CCCAATTGGG TACCTATCAG AGCAGCCTTC GTAGTCTAAT CGCTAAGGGT TGGGTGTATT CTCAAGAGAA ACCTATCTAC AAGAGCATCC CCCCTTCCAA AGAGCATCTT AGACATCCAC TCAATGACGC TCAGAAAGCG GCTGTTACCA CTATTCTCGC ATCTCAGCAG AAATTTCGGC CTTTCTTACT GGAAGGCGTG ACAGGCAGCG GTAAAACAGA AGTCTATCTA CGGGCCATCG AAGAGATCAT TGCTAAAAGC CGGCAGGCTC TAGTACTCAT TCCAGAGATC GGATTGACTC CCCAAATGGT GGAACGCTTT CACCGCTATC TTCAAACTCC TATCACAGTT TTGCATTCCG CCCTCAGTGA CCGAGAGCGT TTAGCCGCCT GGCTTGCTGC TTACGAGGGC AAAACTCCAG TGGTTATCGG TACTCGTTCA GCAATATGGG CCCCTCTCCC GCGGCTTGGA ATAATTATTA TTGATGAAGA GCACGATTCT TCCTTTAAAC AACAGGAAGG ATTTCACTAC CATGCCCGGG ATCTCGCCAT CATGCGAGCA TACCAAACCA AAATACCCAT TATATTAGGC AGTGCAACGC CCTCCTTGGA AAGTCTCGAT AATGTCAAGC GGCAACGCTA CCATTTATTA CAATTATTAC AACGGGCAGG GGCAGCACAA ACACCGCGAA TTCAGCTACT TGACGTCCGT TCACGTCCGT TAGAGTTTGG ACTTTCTCCT CCTCTGCTTG CAGCATTGAG GTATCACTTA GGACAGGGAA ATCAGGCTCT GCTATTTCTT AACCGGCGTG GTTTCGCTCC CACTTTAATC TGTCATGAAT GTGGCTTTGC CGTGCCTTGC CACCGCTGTG ACGCTTACAT GACTGTTCAT CAACATACTA ACCGATTACG TTGCCACCAC TGTGGGGCAG AAGGCTCCCT GCCCACCTCC TGCCCTCAGT GTAGAAATCT TCTTTTGCGT CCCCGGGGAT TAGGTACAGA ACAGGTGGAA GCAGGCCTCA AGCATTTTTT TCCAGAGATT GAGATTGCGC GTGTCGACAG GGATACCACC CGTCGGGCAG GCACCTTGAA TAAAATGCTC GATGGTATCC ATAATGGAAA ATACCGTCTC CTGATTGGAA CTCAGATGTT AGCAAAAGGG CACCACTACC CCAATATCAC TTTGGCGGGA ATTCTGGACG CCGACCAAGG TCTGTTTGGC AGTGATTTTC GGGCTGGGGA GCATATGTCT CAGCTTATTC TCCAGGTAAT AGGACGGACT GGCCGGGGTA ATAAGCCTGG CGAAGTATTG ATCCAAACGC ATCACCCTGA GCATCCCTTA CTAACGGCGC TAGTAGGCCA TGGGTATCGG CACGTAGCCG AGATACTCTT GGAAGAACGC CGCCAAATTG GCTTTCCTCC CTATGGTTAC CTCGCTCTAC TTCGTGCCAG GGCTGTATCC CCTGACTCTC CCATGAAATT CCTTGAAATG GCGCGGAGCA TGGCTACGGC GCATAATCTC CATGGCGTGA CCTTGCTAGG ACCCGTGCCT GCTCCCATGG AGCGCCGAGC CGGCCGCTAC CGCGCCCAGC TTTTACTCCA GGGAAGCGCT CGTGCTCCGC TGCAACGATT ATTGACCACA TGGATACCCA CGCTAGAACG TCTCCAAGCA GCACGGAAGG TACGATGGTC ATTAGATGTG GACCCTATCG ATCTCATGTA G
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Protein sequence | MAVPPILRLA IPSPLRRYFD YLPPAKTPYQ QLQPGIRLQV PFGRRTLIGI LVTIASQSEI ETSKLRRAQY CLDKTPVVPN SLLQLLTWAA SYYHHSPGEV FFSALPQLLR QGKPATSPIY RQWLLSSKDC TTDATILSRA PRQQQLVELL RYHPEGLTSS QIKAQLGTYQ SSLRSLIAKG WVYSQEKPIY KSIPPSKEHL RHPLNDAQKA AVTTILASQQ KFRPFLLEGV TGSGKTEVYL RAIEEIIAKS RQALVLIPEI GLTPQMVERF HRYLQTPITV LHSALSDRER LAAWLAAYEG KTPVVIGTRS AIWAPLPRLG IIIIDEEHDS SFKQQEGFHY HARDLAIMRA YQTKIPIILG SATPSLESLD NVKRQRYHLL QLLQRAGAAQ TPRIQLLDVR SRPLEFGLSP PLLAALRYHL GQGNQALLFL NRRGFAPTLI CHECGFAVPC HRCDAYMTVH QHTNRLRCHH CGAEGSLPTS CPQCRNLLLR PRGLGTEQVE AGLKHFFPEI EIARVDRDTT RRAGTLNKML DGIHNGKYRL LIGTQMLAKG HHYPNITLAG ILDADQGLFG SDFRAGEHMS QLILQVIGRT GRGNKPGEVL IQTHHPEHPL LTALVGHGYR HVAEILLEER RQIGFPPYGY LALLRARAVS PDSPMKFLEM ARSMATAHNL HGVTLLGPVP APMERRAGRY RAQLLLQGSA RAPLQRLLTT WIPTLERLQA ARKVRWSLDV DPIDLM
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