| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0028 |
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| Symbol | |
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| ID | 3705961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 25794 |
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| End bp | 28004 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637736552 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_342100 |
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| Protein GI | 77163575 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTAC CTCCTATCCT GCGTTTAGCT ATTCCTTCCC CCCTGCGACG CTACTTTGAT
TATCTCCCGC CAGCTAAAAC TCCGTACCAA CAATTGCAAC CAGGTATACG TTTACAAGTT
CCTTTTGGCA GACGCACCCT GATCGGTATC TTAGTAACAA TCGCATCTCA AAGCGAGATC
GAAACCAGCA AATTGAGACG AGCTCAATAC TGCCTGGACA AAACCCCCGT CGTTCCCAAC
TCTCTGCTCC AGCTTCTTAC TTGGGCCGCT AGTTATTACC ACCACTCCCC TGGAGAAGTC
TTTTTTTCTG CTTTACCCCA ACTTCTACGC CAAGGAAAGC CCGCCACCTC TCCTATCTAT
CGGCAATGGC TTTTAAGCTC TAAAGACTGC ACCACAGATG CGACGATTCT TAGCCGCGCA
CCCCGGCAAC AGCAGCTTGT GGAATTATTA CGCTATCACC CAGAGGGCTT AACTTCATCC
CAAATCAAGG CCCAATTGGG TACCTATCAG AGCAGCCTTC GTAGTCTAAT CGCTAAGGGT
TGGGTGTATT CTCAAGAGAA ACCTATCTAC AAGAGCATCC CCCCTTCCAA AGAGCATCTT
AGACATCCAC TCAATGACGC TCAGAAAGCG GCTGTTACCA CTATTCTCGC ATCTCAGCAG
AAATTTCGGC CTTTCTTACT GGAAGGCGTG ACAGGCAGCG GTAAAACAGA AGTCTATCTA
CGGGCCATCG AAGAGATCAT TGCTAAAAGC CGGCAGGCTC TAGTACTCAT TCCAGAGATC
GGATTGACTC CCCAAATGGT GGAACGCTTT CACCGCTATC TTCAAACTCC TATCACAGTT
TTGCATTCCG CCCTCAGTGA CCGAGAGCGT TTAGCCGCCT GGCTTGCTGC TTACGAGGGC
AAAACTCCAG TGGTTATCGG TACTCGTTCA GCAATATGGG CCCCTCTCCC GCGGCTTGGA
ATAATTATTA TTGATGAAGA GCACGATTCT TCCTTTAAAC AACAGGAAGG ATTTCACTAC
CATGCCCGGG ATCTCGCCAT CATGCGAGCA TACCAAACCA AAATACCCAT TATATTAGGC
AGTGCAACGC CCTCCTTGGA AAGTCTCGAT AATGTCAAGC GGCAACGCTA CCATTTATTA
CAATTATTAC AACGGGCAGG GGCAGCACAA ACACCGCGAA TTCAGCTACT TGACGTCCGT
TCACGTCCGT TAGAGTTTGG ACTTTCTCCT CCTCTGCTTG CAGCATTGAG GTATCACTTA
GGACAGGGAA ATCAGGCTCT GCTATTTCTT AACCGGCGTG GTTTCGCTCC CACTTTAATC
TGTCATGAAT GTGGCTTTGC CGTGCCTTGC CACCGCTGTG ACGCTTACAT GACTGTTCAT
CAACATACTA ACCGATTACG TTGCCACCAC TGTGGGGCAG AAGGCTCCCT GCCCACCTCC
TGCCCTCAGT GTAGAAATCT TCTTTTGCGT CCCCGGGGAT TAGGTACAGA ACAGGTGGAA
GCAGGCCTCA AGCATTTTTT TCCAGAGATT GAGATTGCGC GTGTCGACAG GGATACCACC
CGTCGGGCAG GCACCTTGAA TAAAATGCTC GATGGTATCC ATAATGGAAA ATACCGTCTC
CTGATTGGAA CTCAGATGTT AGCAAAAGGG CACCACTACC CCAATATCAC TTTGGCGGGA
ATTCTGGACG CCGACCAAGG TCTGTTTGGC AGTGATTTTC GGGCTGGGGA GCATATGTCT
CAGCTTATTC TCCAGGTAAT AGGACGGACT GGCCGGGGTA ATAAGCCTGG CGAAGTATTG
ATCCAAACGC ATCACCCTGA GCATCCCTTA CTAACGGCGC TAGTAGGCCA TGGGTATCGG
CACGTAGCCG AGATACTCTT GGAAGAACGC CGCCAAATTG GCTTTCCTCC CTATGGTTAC
CTCGCTCTAC TTCGTGCCAG GGCTGTATCC CCTGACTCTC CCATGAAATT CCTTGAAATG
GCGCGGAGCA TGGCTACGGC GCATAATCTC CATGGCGTGA CCTTGCTAGG ACCCGTGCCT
GCTCCCATGG AGCGCCGAGC CGGCCGCTAC CGCGCCCAGC TTTTACTCCA GGGAAGCGCT
CGTGCTCCGC TGCAACGATT ATTGACCACA TGGATACCCA CGCTAGAACG TCTCCAAGCA
GCACGGAAGG TACGATGGTC ATTAGATGTG GACCCTATCG ATCTCATGTA G
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| Protein sequence | MAVPPILRLA IPSPLRRYFD YLPPAKTPYQ QLQPGIRLQV PFGRRTLIGI LVTIASQSEI
ETSKLRRAQY CLDKTPVVPN SLLQLLTWAA SYYHHSPGEV FFSALPQLLR QGKPATSPIY
RQWLLSSKDC TTDATILSRA PRQQQLVELL RYHPEGLTSS QIKAQLGTYQ SSLRSLIAKG
WVYSQEKPIY KSIPPSKEHL RHPLNDAQKA AVTTILASQQ KFRPFLLEGV TGSGKTEVYL
RAIEEIIAKS RQALVLIPEI GLTPQMVERF HRYLQTPITV LHSALSDRER LAAWLAAYEG
KTPVVIGTRS AIWAPLPRLG IIIIDEEHDS SFKQQEGFHY HARDLAIMRA YQTKIPIILG
SATPSLESLD NVKRQRYHLL QLLQRAGAAQ TPRIQLLDVR SRPLEFGLSP PLLAALRYHL
GQGNQALLFL NRRGFAPTLI CHECGFAVPC HRCDAYMTVH QHTNRLRCHH CGAEGSLPTS
CPQCRNLLLR PRGLGTEQVE AGLKHFFPEI EIARVDRDTT RRAGTLNKML DGIHNGKYRL
LIGTQMLAKG HHYPNITLAG ILDADQGLFG SDFRAGEHMS QLILQVIGRT GRGNKPGEVL
IQTHHPEHPL LTALVGHGYR HVAEILLEER RQIGFPPYGY LALLRARAVS PDSPMKFLEM
ARSMATAHNL HGVTLLGPVP APMERRAGRY RAQLLLQGSA RAPLQRLLTT WIPTLERLQA
ARKVRWSLDV DPIDLM
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