| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0022 |
|---|
| Symbol | |
|---|
| ID | 3705955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 18366 |
|---|
| End bp | 19184 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637736546 |
|---|
| Product | formylmethanofuran dehydrogenase |
|---|
| Protein accession | YP_342094 |
|---|
| Protein GI | 77163569 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2218] Formylmethanofuran dehydrogenase subunit C |
|---|
| TIGRFAM ID | [TIGR03122] formylmethanofuran dehydrogenase subunit C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACGCAC TAACTCTGAT TCTAAAAGAA ATTCCTAGCC AGCAGGTGGA TGCATCGCCC
CTCATCCCGG AGAATTTAAT CGGCCTATCG AAACCCGAGA TAGCTGCGAT TACTCTGGTA
ACGGGTAATC AGCACGTGCG AGCAGATACC ATTTTTAATA TTTCAGGAGA CGATCCAGGA
CGGTTAATTT TCGCAGGAGA GACCACCAAG TTGGATTACA TCGGTAAAAA TTGTTCTGGC
GGCCAGATCG ATGTTCAAGG ATCTTGCGGT GCCTATACAG GAATGGGCAT GCATGATGGG
CAAATTAATA TCTACGGGAA TACCGGTGCT TTTACCGCCT GTGAGATGCA AGGCGGATTG
CTCCGGGTAG ATGGAGATAG CGACGATTTT TTAGGGGCCG CCCGCCCCGG CAATCAAATC
GGCATGACAG GAGGAACGGT TATTATTACC GGAAACACGG GTGCCCGTGT TGGAGACCGA
ATGCGCCGAG GAACGCTACT TATTGAGGGA AACGCAGGTA ATTATGCGGG CTCGCGTATG
TTAGCAGGCA CAATTGCGAT ATTAGGTAAA ACCGGAAATT ACCTAGGGTA TGGTATGAAG
CGCGGAACTC TTTTACTATG GCATCCCCCT GATAAACTAA GCGCGACCTT TAATGACTGC
GGCTATCACA CTCTGGGGTT CTTGCCCCTC CTGCTGGAAT CCTACCGTAG TCTAGAAACC
CGATTTGCCT TTCTCCCTAA AACCATTGGC CGGGCGCATC GATTTTGTGG TGATATGGCC
AGTCTGGGCC ATGGCGAAAT TTTAATCCTG GTGCCGTGA
|
|---|
| Protein sequence | MNALTLILKE IPSQQVDASP LIPENLIGLS KPEIAAITLV TGNQHVRADT IFNISGDDPG
RLIFAGETTK LDYIGKNCSG GQIDVQGSCG AYTGMGMHDG QINIYGNTGA FTACEMQGGL
LRVDGDSDDF LGAARPGNQI GMTGGTVIIT GNTGARVGDR MRRGTLLIEG NAGNYAGSRM
LAGTIAILGK TGNYLGYGMK RGTLLLWHPP DKLSATFNDC GYHTLGFLPL LLESYRSLET
RFAFLPKTIG RAHRFCGDMA SLGHGEILIL VP
|
|---|
| |