Gene Noc_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0017 
Symbol 
ID3705950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp10544 
End bp11101 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content52% 
IMG OID637736541 
Producttransposase ISY100e 
Protein accessionYP_342089 
Protein GI77163564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTAATG TTGGTGTGAG CAGAAGAATG CATGATGCTC TCAAGCGTCT TGGCATCCGT 
AAAAAAAGAG TGATGCCCTA TGAAAAGCAA GCGTTTTTGG GAAAACTCGC CGCCGGAGAC 
CGGACGTTCG GATTCAGGAA CCTTGTTTAT ATTGATGAGA GCGGTTTTAA GGCCCATTGC 
CATAGGGATG CGGGGTGGGT AGACAAAGGA CAGCAGCTCC TCAGGCTTTC ATCGGCAAGC 
GCAAACGCCG CGCCCACCTG GGCATGGCCC AGCGCCATAA CGCCAGGGGG GCGCAAGAAG 
GAATGGCTGG CGCCCATGCT CCTTGAAGGC TCATGCACCT CTCAACTGCT CGAAACATGG 
GTGGAGCAAT GCCTCATAAA AGCGTTGCAT GACCCCACTC TCATCATCAT GGGCAATGCT 
TCATTCCACC ATCACAAACG CATTCAGGAC ATCGTGGCCA AGGATTACCA TGATATGATC 
CCGTTGCTGC CCTCTTCTGC AGACCTCAAC CCCATTGAAA AAACGAAGAT AATCCATGGC 
ACAGGAGGCG GCAATTGA
 
Protein sequence
MFNVGVSRRM HDALKRLGIR KKRVMPYEKQ AFLGKLAAGD RTFGFRNLVY IDESGFKAHC 
HRDAGWVDKG QQLLRLSSAS ANAAPTWAWP SAITPGGRKK EWLAPMLLEG SCTSQLLETW 
VEQCLIKALH DPTLIIMGNA SFHHHKRIQD IVAKDYHDMI PLLPSSADLN PIEKTKIIHG 
TGGGN