| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_A0015 |
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| Symbol | |
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| ID | 3704318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007483 |
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| Strand | + |
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| Start bp | 12194 |
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| End bp | 13126 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637736510 |
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| Product | Phage integrase |
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| Protein accession | YP_342058 |
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| Protein GI | 77163532 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.230922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAAAA AAGCCGTTGA TTTCTGGCAG GCACGAAAAG ACTTCCTGGC GCATCTGCAT
TACGCCAAGG GGTACAGTCA GGGGACCTGC TATGCCTACA ACTCGGACCT GGGCATTTGG
GGCCGCTGGC TGGCAGAAGT GGGCAAGGAC TGGTGTCAGG CCACCCATGC AGACACCGAG
AAGTTTGTGG CCTGGCAGAT GCGGGAGCGG GGCGCCAAGG CGCACATCGT GGCCCGCCGC
TCCAGTTGCC TAGGCTCGTT CTACAAATGG GCCATGAAGA ATGCCCTGGT GGAATCAGAC
CCCATCTATC TCGCTGATAA GCCCAAGCGT CCCTATCGCA TCCCCGTCTG GCTAGAGAAG
GAAGAGCAAC AAGCGCTCCA GGAAGCGACC CAGCGGATAG ACAATTTACC CGAGAATATC
TTCGGGCGTA CCCAGGAGCA TATTAAAGCG GTCCGGCGTC GCTATGATGT CCTGTTTGGC
CTTATTCTCA ACAGCGGCCT GCGAATCAGC GAAGCTCTGG CCGTGAAAGT CCGGGATGTG
CGGGTGATGA ACGGGATCGC TAAATCCGTG CGGATCATCG GCAAGGGCAA CCGGGAACGG
CTGGTGCCAC TACCGGAAGC CTTCGGCCAA GTATTCGGGG CTTGGCTACA GGGCAGGGAA
GGGGACGATT TCGTGTTCGC CAAAGCCCCG GGGGGAAAAC CGCCTGGACC CCATGCGGCG
CGGGCCTATT TGCGGCGGCT CATTGAACGG GCGGGCATCG ACAAGCCCGT GACTCCCCAC
AAGCTGCGTC ATACTTACGC CACGCGGCTA CTAGAATCAG GTGCCGAGTT GGTGGACATC
CAGGCTTTGC TGGGGCACGT GGATTTATCC ACCACCCAGA TTTACACCCA TGTGAGCGAG
GAGCGGATGG CCGGGGTGGT GGCGAAGTTG TAG
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| Protein sequence | MEKKAVDFWQ ARKDFLAHLH YAKGYSQGTC YAYNSDLGIW GRWLAEVGKD WCQATHADTE
KFVAWQMRER GAKAHIVARR SSCLGSFYKW AMKNALVESD PIYLADKPKR PYRIPVWLEK
EEQQALQEAT QRIDNLPENI FGRTQEHIKA VRRRYDVLFG LILNSGLRIS EALAVKVRDV
RVMNGIAKSV RIIGKGNRER LVPLPEAFGQ VFGAWLQGRE GDDFVFAKAP GGKPPGPHAA
RAYLRRLIER AGIDKPVTPH KLRHTYATRL LESGAELVDI QALLGHVDLS TTQIYTHVSE
ERMAGVVAKL
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