| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2542 |
|---|
| Symbol | pcaC |
|---|
| ID | 3692267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 3060441 |
|---|
| End bp | 3060839 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637732796 |
|---|
| Product | 4-carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_337692 |
|---|
| Protein GI | 76819716 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0234299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG CAGACCGCGA GCAAGGCAAG GCGCGCCGCA CGCAGGTGAT GGGCGATGCG
TTCGTCGAGC GCGCGATGAG CGATCTGGAC GGCTTTTCGC GGCCGTTGCA GGACTGGCTG
AACGAGCACG CATGGGGCAG CACGTGGCGG CGCGGCGGCA TCGATCTGAA GACGCGCAGC
CTGTGCACGT GCGCGATGCT CGCGGCGCTC GGGCGCGGAC ACGAGCTCAA GGGGCACATT
CGCGGCGCGT TGAACAACGG CGCGAGCCTC GTCGAGATTC GTGAGGTGCT GCTGCACAGC
GCGTTGTACG CGGGTGCGCC GGCCGCCGTC GAGGCGTTTC GCCATGCGCG CGAAGTGATC
GACGCGCTGG CGCTCGATGT GCCCGACGAC GGCGCGTGA
|
|---|
| Protein sequence | MSEADREQGK ARRTQVMGDA FVERAMSDLD GFSRPLQDWL NEHAWGSTWR RGGIDLKTRS
LCTCAMLAAL GRGHELKGHI RGALNNGASL VEIREVLLHS ALYAGAPAAV EAFRHAREVI
DALALDVPDD GA
|
|---|
| |