Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A2427 |
Symbol | vsrD |
ID | 3693812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 2942806 |
End bp | 2943654 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637732681 |
Product | LuxR family DNA-binding response regulator |
Protein accession | YP_337577 |
Protein GI | 76817367 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGTGG GCCGCCGCGC CCATGGCGAT GACCATGGCC GCGGCCGCGT GCGCTTGCGC CGGCGCGGCC CCACCGGCGC CGGCCGAGCC CGGTCGCGAA CGCGGCTCGC AGCCGCGCAA CGGCCCGGCG TTGCTCGCGC CGCGCGCCGC TCGCCGGTCG GCCTCCTCGA TGCAGTCGAC TCGACAGGAA GATTTCCACC CATGATCAAG GTTCTGATTG CCGACGACCA CGCGCTCGTG CGCGACGGTC TGCGCCATAT CCTGCAGAAT GCGTCCGGCT ACGAAGTCGC CGGTGAAGCG TTCGACAGCG CGACGACGAT CGCGCTCGTG CGCTCGACGC CCGCGCAAGT GCTCGTGCTC GATCTGTCGA TGCCGGGCCG CAACGGCGTC GAGCTGATCA AGCAGATCAA AGAGGAGAAG CCCGCGCTGC GGATCCTGGT GCTGACGATG CATGCGGAGC AGCAGTACGC GGTGCGCGCG TTCCGCGCGG GCGCCTCCGG CTATCTGACG AAGGAGAGCG CGAGCTCGGA GCTCGTCGGC GCGGTGACGA AGGTCGCCTC GGGCGGCGTC TACGTGAGCC TCGCGATGGC CGAGCGCTTC GCGCAGAGCC TGAACGAGCC GGCGGAGACG CTGCCGCACC ACCGGCTGTC GGACCGCGAG TTCGACGTGT TCCGCCGGAT CGCCTCCGGC CAGACGCTCA CGCAGATCGC CGACGAGCTG TGCGTGAGCG CGAAGACGGT CAGCACGTAC AAGACGCGGA TTCTCGAGAA GATGCAGATG CCGCACGAAG CGGCGCTCGT GCGCTACGCG TTGCGGCACA AGCTGATCGA CGATCCGGAC GAGGATTGA
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Protein sequence | MGVGRRAHGD DHGRGRVRLR RRGPTGAGRA RSRTRLAAAQ RPGVARAARR SPVGLLDAVD STGRFPPMIK VLIADDHALV RDGLRHILQN ASGYEVAGEA FDSATTIALV RSTPAQVLVL DLSMPGRNGV ELIKQIKEEK PALRILVLTM HAEQQYAVRA FRAGASGYLT KESASSELVG AVTKVASGGV YVSLAMAERF AQSLNEPAET LPHHRLSDRE FDVFRRIASG QTLTQIADEL CVSAKTVSTY KTRILEKMQM PHEAALVRYA LRHKLIDDPD ED
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