| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2395 |
|---|
| Symbol | tyrB1 |
|---|
| ID | 3692680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 2903814 |
|---|
| End bp | 2905016 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637732649 |
|---|
| Product | aromatic amino acid aminotransferase |
|---|
| Protein accession | YP_337545 |
|---|
| Protein GI | 162210106 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.441327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAC ACATCGATGC CTACCCCGGC GATCCGATTC TCACGCTGAA CGAGAACTTT
CAGCAGGACC CGCGCACGCG CAAGGTCAAT CTGAGCATCG GCATCTATTT CGACGACGAC
GGCCGGATTC CGGTGATGGG CGCCGTGCGC GAGGCCGAGG CCATCGTGCA GCGCGAATCC
GGTCCGAAGC CGTATCTGCC GATGACGGGG CTCGCCGCGT ATCGCGACGC GGTGCAGGCG
GTGGTGTTCG GCGAGGGCAG CGATGCGCGC GCGGCCGGGC GCATCGCGAC GGTGCAGACG
CTCGGCGGCT CGGGCGCGCT CAAGGTGGGC GCGGATTTCA TCAAGCGCTA CTTTCCGCAC
GCGCAGGTGT GGATCAGTGA TCCGAGCTGG GAGAACCACC GGTTCATCTT CGAGCGCGCG
GGCTTCACGG TCAACACGTA TCCGTACTAC GACGAGGCGA CGGGCGGCCT GAAATTCGAT
GCGATGCTGG CCGCGATCGA CGCGCTGCCG CACAAGAGCG TCGTGCTGCT GCACGCGTGC
TGCCACAACC CGACGGGCGT CGATCTCGAC GACGCGCAGT GGCTCAAGCT GATCGACGTG
TTGCAGGCAC GCGAGTTGCT GCCTTTCGTC GACATGGCGT ACCAGGGTTT CGGCGCGGGT
CTTGCGGCCG ATGCGTTCGC GATTCGCGAA CTCGCGCGCC GCGGGATGCC GGCGTTCGTC
GCGAACTCGT TCTCGAAGAA CTTCTCGCTG TACGGCGAGC GCGTCGGCGC GCTGTCGGTG
ATCTGCGAGG ACGCGGCGGC CGCCGCGCGC GTGCTCGGCC AGCTCGCGGG CGCGGTGCGC
TCGAACTACA GCAACCCGCC GACCTGCGGC GCGAAGATCG TTGCGCAGGT GCTGACGACG
CCCGCGCTGC GCGCGCAATG GGAGGAAGAG CTCGCGGCGA TGTGCCGGCG CATCGCGAAG
ATGCGCAGCG CGATTCACGA CGGCCTGCGC GCGCATGTGC CGGCCGAGGC GCTCACGCGC
TACGTGAAGC AGCGCGGGAT GTTCACGTAC ACGGGGCTGA CCGAGGCGCA GGTCGAATGC
CTACGCGAGC AGCACGGCGT CTATGTCCTG CGCTCGGGCC GGATGTGCGT CGCCGGGCTG
AACGAGGCAA ACGTCGGGAT CGTCGCGGAT GCGATCGGCG CGGTGATCGC GAGCGGCGTC
TGA
|
|---|
| Protein sequence | MFEHIDAYPG DPILTLNENF QQDPRTRKVN LSIGIYFDDD GRIPVMGAVR EAEAIVQRES
GPKPYLPMTG LAAYRDAVQA VVFGEGSDAR AAGRIATVQT LGGSGALKVG ADFIKRYFPH
AQVWISDPSW ENHRFIFERA GFTVNTYPYY DEATGGLKFD AMLAAIDALP HKSVVLLHAC
CHNPTGVDLD DAQWLKLIDV LQARELLPFV DMAYQGFGAG LAADAFAIRE LARRGMPAFV
ANSFSKNFSL YGERVGALSV ICEDAAAAAR VLGQLAGAVR SNYSNPPTCG AKIVAQVLTT
PALRAQWEEE LAAMCRRIAK MRSAIHDGLR AHVPAEALTR YVKQRGMFTY TGLTEAQVEC
LREQHGVYVL RSGRMCVAGL NEANVGIVAD AIGAVIASGV
|
|---|
| |