| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2160 |
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| Symbol | |
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| ID | 3694229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 2637469 |
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| End bp | 2639643 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637732414 |
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| Product | sigma-54 activated regulatory protein |
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| Protein accession | YP_337311 |
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| Protein GI | 76819725 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGATG GCGGGGACCG TCGACGATTT CCGCGCCGGT CCGCGCGGGG CGCGACGCGT
GCGCACCCTG TTTCCATCAT TGCAGGCCGA CGCGCAAAAG CAAGGGAAAT TCGATTTGCG
GTCGCACATC GCGCGCGGCG CTTGTATGAT GGGACGTGCC CGCGCCGCCA CGTCCACCGC
TGCGCCGGTC GAGCGGAGAA CGCACTCCGC CGGCGGGCCT CCTGGAGACA AGTCATGCCG
CAATCTTCCG TGCTGCCCGC CGCGGCGAGC CGCGTCGATC TGCTCGCGCA AGCGCACGCC
CGCTCGCTGT CGGTCGGCCT GCGCGCGTCC GAGCTGCCCG ATTTCTCGCC GCTGTCGCGC
GCCGCGCTGC GCGAGCTGAT CGACGGCAGC CAATCGCTGT ACACGCACGC GCGCCCGGTG
ATGGACACGC TGCACACGCA GATCGCCGAT ACGCAAAGCC TCGTGCTGCT GACCGACCGC
GACGGCGTGA TCCTGCACAG CATCGGCGAC GCCGATTTCG TCGAAAAGGC GAATCGGGTC
GCGCTCTGCC CCGGCGTGTC ATGGGCGGAA GACGCGCGGG GCACGAATGC GATCGGCACC
GCGCTGATCG CGGGCCAGGC GCTCGCCGTG CACGGCGCCG AGCATTTCCT GCGCGCGAAT
CACGTGCTCA CCTGCTCGTG CGCGCCGATC GTCGATCCGT TCGGCCGCCT CCTCGGCGCG
CTCGACGTGA GCGGCGATCC GCGCGGCTTC AGCCCGCATA CGCTCGCGCT CGTGAAGATG
TCCGCGCAAC TGATCGAAAA CCATCTGTTC GCGAATCAGT GCGCGGACGC GCTGCGCGTG
CGCTTTCACG CGCACGACGA ATTCGTCGAT TCGCTGTTCG CCGGCCTCGT CGCGTTCAGC
CCGAGCGGTG CGCTGATCGC GGCCAATCGC AGCGCACAAT TCCAGCTCGG CGCGAATCTC
GATGCACTGC AACAGCGCGG TTGCGACGAA CTGTTCGGCC TGTCTTTCGC GAAGCTCGCG
CAGCATGCGG CGCGCGAACC GCTCGCGTGC TTCACGCTGA CGCTCGGCAC CGGCGTGCGC
GTGCGCGCGC GCTGCGAATT CGCGCACGCG CAGCGCACGG CCGTTGCGGT GAGCGGGCGC
GCCGCGCCGC CGCGCGCAAC CGATGCGGCG CGCGACGAGG AGCCCGACGC GATCACGTTC
GCGACGCTCG ATACGGGCGA TGCGCGCATG ACCGCCGTGC TGCAGCGGGT CGGCAAGGTG
CGCGGGCGCG ACCTGCCGGT GCTCGTGCTC GGCGAAACCG GCACCGGCAA GGAATGGCTC
GCGCGCGCGC TGCACCACGC GTCGCCGCGC CGCGACGGCC CGTTCGTCGC GGTCAACTGC
GCGGCGCTGC CCGATTCGCT GATCGAAGCG GAACTATTCG GCTACGAGGA CGGCGCGTTC
ACCGGCGCGC GCAAGCGCGG CAGCCCCGGC AAGATCGCGC AGGCGGACGG CGGCACGCTG
TTTCTCGACG AAATCGGCGA CATGCCGCTC GCGCAGCAGG TCCGGCTGAT GCGCGTGCTG
CAGGAGCGCG CGGTGATGCC GCTCGGCGGC GCGCGCGCGG TGCCGGTGGA CGTGCGGATC
GTCTGCGCGA CGCACCGCGA CCTGCGCGCG ATGATCGCCG CCGGCACGTT TCGCGAGGAT
CTGTTCTACC GGATCAACGG CCTGGCGGTC ACGCTGCCGC CGCTTGCCGA GCGCTCGGAT
CTCGAGACGC TCGTCGCCCG CGTGCTCGCG CGGCTCGCGC GCAGCGAGCC GATGCCGGCC
ACCGTGTCGG CGGCGGTGCT CGCCGCGTTC GCGCGCTGCC GGTGGCCGGG CAATCTGCGT
CAAATGACGA ACGTGCTGCG CACGGCGGGC ATGCTCGCCG AAGGCGAAGC GCGGATCGAC
GTCGAGCATC TGCCTGACGA TTTCTGGCTC GACTGCGACG CGCGCGCGCG CGATGCGGCA
CCGCCGCGCA CGTGTGCCGA CGCGGCGGCG GGCGCGGCAG CGGCCGGCGC CTCGACGCTG
CAGGATCATC AGGTCGCGCT GATCGACGGC GCGCTCGACC GGCATCGCGG CAACGTATCG
GCGGCCGCGC GCGAGCTCGG GCTCGCGCGC AATACCGTCT ATCGGCATTT GCGTAGACGG
CGGTCGGGGG AGTGA
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| Protein sequence | MLDGGDRRRF PRRSARGATR AHPVSIIAGR RAKAREIRFA VAHRARRLYD GTCPRRHVHR
CAGRAENALR RRASWRQVMP QSSVLPAAAS RVDLLAQAHA RSLSVGLRAS ELPDFSPLSR
AALRELIDGS QSLYTHARPV MDTLHTQIAD TQSLVLLTDR DGVILHSIGD ADFVEKANRV
ALCPGVSWAE DARGTNAIGT ALIAGQALAV HGAEHFLRAN HVLTCSCAPI VDPFGRLLGA
LDVSGDPRGF SPHTLALVKM SAQLIENHLF ANQCADALRV RFHAHDEFVD SLFAGLVAFS
PSGALIAANR SAQFQLGANL DALQQRGCDE LFGLSFAKLA QHAAREPLAC FTLTLGTGVR
VRARCEFAHA QRTAVAVSGR AAPPRATDAA RDEEPDAITF ATLDTGDARM TAVLQRVGKV
RGRDLPVLVL GETGTGKEWL ARALHHASPR RDGPFVAVNC AALPDSLIEA ELFGYEDGAF
TGARKRGSPG KIAQADGGTL FLDEIGDMPL AQQVRLMRVL QERAVMPLGG ARAVPVDVRI
VCATHRDLRA MIAAGTFRED LFYRINGLAV TLPPLAERSD LETLVARVLA RLARSEPMPA
TVSAAVLAAF ARCRWPGNLR QMTNVLRTAG MLAEGEARID VEHLPDDFWL DCDARARDAA
PPRTCADAAA GAAAAGASTL QDHQVALIDG ALDRHRGNVS AAARELGLAR NTVYRHLRRR
RSGE
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