| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2088 |
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| Symbol | |
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| ID | 3694084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 2541789 |
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| End bp | 2543150 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637732342 |
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| Product | hypothetical protein |
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| Protein accession | YP_337239 |
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| Protein GI | 76817649 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0852077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGTC TGCCGGTAGG ACCGGTCGCG TGGAGCGACG GCATGCTGAT CGAGACGCAG
CACTTCCAGC AGCTCGAGCG GCATCTCGCG CATCAGGCCT CGCTGCGGCT CGGTCAGACG
TCGAATCACG GCTGGGGCTT CACGCTGCTC GATCTCGACC AGGACGGCCT GGGGCTCGGC
CGGCTCGGGC TGCGCCACGC GCGCGGCGTG TTCCAGGACG GCACCGCGTT CTCGCTGCCG
TCGGACGATC CGCTGCCGCC GCCGCTGGAA ACCGAGCTCG CGCAGGCGGG CGACATCGCG
TGCCTCGCGC TGCAGGCCGC GCGCACGGGC GGCCCGGAGA TGGCGTTCGG CGACGTCGAG
CTGGCGTCGC GCTATCGCGC GGTGTCGACC GAGGTGCCGG ATCTCGCGGT CGGGCTCGAC
GCGCCCGGCA CGCCGCGGCG CCTGACGATC GAGACGGGCC AGCTCGTCAC GCGCCTGTGC
TGGAAGTCGC AGCTGCGCTC GGACGAGGTC GCGCTGCCGA TCGCGCGCGT GGCGGGGCGC
AACGCGAGCC GCACGGTGTC GCTGGATCCG CGCTTCATTC CGCCGCTGCT CGACACGCGC
GCGCACCTGG TGCTGCGCTC GCTGATCGAC GAGCTGCAGA GCACGCTGCG CGTGCGGCTC
GCGAGCACGT CCGCGCAGCG CGTGCTGTCG ACGGGCGGGG GCGTGGCCGA TCTGATCGAG
CTGCTGCTGC GCCAGGCGAT CGCCGAGTAC CGGATGCGCT TGGCGAACCT CGACGCGTTC
GATCCGCTGC CGCCGGCGAT GCTGTATCAC GAGCTGGTCG GCCTGCTCGG GCGGCTGAGC
GTGCTGCCGG GCGTCGACGA GGAACTGGCC GACCGCGAGC TCGGCTACGA CCACGACGAT
CTGCAGACGA GCTTCGAGCC GCTCGCGATG ATGCTGCGCC AGGCGCTCGC GCGCGTGATC
GAGACGCCGG TGCTGCCGCT GCGCTTCGAG GATCGCGGCG ATCAGGTGCA CATCTGCATC
GTCGACAAGC AGTGGAACCT GAAGAAACTG ATTTTTGCGT TTTCGGCCGC GATGCCGGCG
GAGAAGCTGC GGCAACTGTT GCCGCAGCAG ACGAAGCTGG GCGCCGTCGA GCAGATCCAG
AAGCTCGTGG ACCTGCAACT GCCGGGCGCG CGGCTGAACG CGCTGCCCAA TCCCCCGCGC
CAGATTCCCT ACTACGCCCA AAGCACGTAC TTCGAAGTGG AATCGACCGA TCCGTTCTGG
AAGCAGACCC TCGCCGGCTC GGCGATGGCG CTGCGCATCG TCGGCGATTT CCCCGATCTT
CGCTTCGAAG CCTGGGGGCT GAGAGACGGC AAGGTGGCGT GA
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| Protein sequence | MSSLPVGPVA WSDGMLIETQ HFQQLERHLA HQASLRLGQT SNHGWGFTLL DLDQDGLGLG
RLGLRHARGV FQDGTAFSLP SDDPLPPPLE TELAQAGDIA CLALQAARTG GPEMAFGDVE
LASRYRAVST EVPDLAVGLD APGTPRRLTI ETGQLVTRLC WKSQLRSDEV ALPIARVAGR
NASRTVSLDP RFIPPLLDTR AHLVLRSLID ELQSTLRVRL ASTSAQRVLS TGGGVADLIE
LLLRQAIAEY RMRLANLDAF DPLPPAMLYH ELVGLLGRLS VLPGVDEELA DRELGYDHDD
LQTSFEPLAM MLRQALARVI ETPVLPLRFE DRGDQVHICI VDKQWNLKKL IFAFSAAMPA
EKLRQLLPQQ TKLGAVEQIQ KLVDLQLPGA RLNALPNPPR QIPYYAQSTY FEVESTDPFW
KQTLAGSAMA LRIVGDFPDL RFEAWGLRDG KVA
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