Gene BURPS1710b_A2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A2076 
Symbol 
ID3693153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp2525243 
End bp2525770 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content62% 
IMG OID637732330 
Producthypothetical protein 
Protein accessionYP_337227 
Protein GI76817268 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATG CTTTGGTTGA TTACTTCTTG CAGATCGATG GCGTCGAGGG TGAGTCGACC 
GATCAGCAAT ATCCCGGTCT GATCCAGATC CAGAGCTGGC AGTGGGCGGA AGAGAACTCG
GGCCGCTGGG GCTTCGGCAG CGGCGGCGGC GCGGGCAAGG TCGAGATGAA GGACTTCGAG
TTCCGCATGG TGTCGAACAA GGCGTCGCCG AAGCTGTTCC TGATGTGCGC GACGGGTGAG
CACATCCAGA ACGCGAAGCT GATCTGCCGC AAGTCGGGCA AGGGCCAGCA GGAGTTCCTG
ACGATCTCGT TCGCGAGCGG CCTCGTGTCG TCGTTCCGCA CGCTCGGCAA CATGCCGATC
TCGCAGCTCG GTCACGCGAG CGGCGAAGTC GACGGCGTGC TGCCGACGGA TCAGATCCGC
ATCAACTTCG CCCAGATCGA GTTCGAGTAC CGCGAGCAGC GCAACGACGG CACGATGGGC
GCCGTGATCA AGGCGGGCTA CGACCTGAAG CAGAACGCGC CGATCTAA
 
Protein sequence
MANALVDYFL QIDGVEGEST DQQYPGLIQI QSWQWAEENS GRWGFGSGGG AGKVEMKDFE 
FRMVSNKASP KLFLMCATGE HIQNAKLICR KSGKGQQEFL TISFASGLVS SFRTLGNMPI
SQLGHASGEV DGVLPTDQIR INFAQIEFEY REQRNDGTMG AVIKAGYDLK QNAPI