Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1822 |
Symbol | gabT |
ID | 3691991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 2214308 |
End bp | 2215591 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637732076 |
Product | 4-aminobutyrate transaminase |
Protein accession | YP_336979 |
Protein GI | 76817728 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACAATG CCGATCTGCA CGCCCGCAAG AACGCCGCGA CGCCGCGTGG CGTCGGCGTG ATGTGCGATT TCTACGCGGC ACGCGCCGAG AACGCCGAGC TGTGGGATGT CGAGGGCCGC CGCTTCATCG ATTTCGCGGC CGGCATCGCG GTCCTGAACA CGGGCCATCG CCATCCGAGG ATCGTGAAGG CGATCGCCGA CCAGCTCGGG CAATTCACGC ATACCGCGTA TCAGATCGTG CCGTACGCGT CGTACGTCGA GCTCGCCGAG AAGATCAACG CGCGCGCGCC GATCGCGCAG CCGAAGAAGA CCGCGTTCTT CACGACGGGC GCGGAAGCGG TCGAGAACGC GGTGAAGATC GCGCGCGCCT ACACCGGCCG GCCGGGCATG ATCGCGTTCG CGGGCGGCTT CCACGGCCGC ACGATGATGG GCATGGCGCT CACCGGCAAG GTCGCGCCGT ACAAGATCGG CTTCGGCCCG TTCCCGGGCG ACGTGTTCCA CGCGCCGTAC CCGAACGCGT TGCACGGCGT GACGAGCGCC GATTCGATCG CGGCCGTCGA AACGCTGTTC AAGGCCGACA TCGATCCGAA GCGCGTCGCC GCGATCATCT TCGAGCCGGT GCAGGGCGAA GGCGGCTTCA ACCCGGCGCC CGCCGAGTTC GTGCGCGCGC TGCGCAAGCT GTGCGACGCG CACGGCATTC TCCTCATCGC CGACGAAGTG CAGACGGGCT TCGCGCGCAC GGGCAAGCTG TTCGCGATGG AGCACTACGA CGTCTCGGCC GACCTGATGA CGATCGCGAA GAGCCTCGCG GGCGGGATGC CGCTGTCGGG CGTCGTCGGC CGCGCGGACG TGATGGACGC GGCCGCGCCG GGCGGCCTGG GCGGCACGTA CGCGGGCAAT CCGCTCGCCG TGGCCGCCGC GCACGCGGTG CTCGACGTGA TCGACGAGGA GAAGCTCGCC GAGCGCGCGA CCGTGCTCGG CGACAAGCTG AAGGCGAAGC TCGCCGCGCT GCGCGCCGAG CTGCCGCAGA TCGTCGACGT GCGCGGCCCG GGCGCGATGG TCGCCGCGGA ATTCGTCGAT CCGCACACGC GCGCGTCCGA TGCCGCGTTC ACGAAGCGCG TGCAGACGCT CGCGCTCGAG CGCGGGCTGC TGCTGCTCAT CTGCGGCGTC GACGCGAACG TGATACGTTT CCTGTTTCCT CTCACCATCG AGGATGCCGT GTTCGACGAA GCGCTCGGCA TTCTCGAGAG CGTGCTGAGG GAAGCGGTGG GCGTGCCCGC CTGA
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Protein sequence | MNNADLHARK NAATPRGVGV MCDFYAARAE NAELWDVEGR RFIDFAAGIA VLNTGHRHPR IVKAIADQLG QFTHTAYQIV PYASYVELAE KINARAPIAQ PKKTAFFTTG AEAVENAVKI ARAYTGRPGM IAFAGGFHGR TMMGMALTGK VAPYKIGFGP FPGDVFHAPY PNALHGVTSA DSIAAVETLF KADIDPKRVA AIIFEPVQGE GGFNPAPAEF VRALRKLCDA HGILLIADEV QTGFARTGKL FAMEHYDVSA DLMTIAKSLA GGMPLSGVVG RADVMDAAAP GGLGGTYAGN PLAVAAAHAV LDVIDEEKLA ERATVLGDKL KAKLAALRAE LPQIVDVRGP GAMVAAEFVD PHTRASDAAF TKRVQTLALE RGLLLLICGV DANVIRFLFP LTIEDAVFDE ALGILESVLR EAVGVPA
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