| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1745 |
|---|
| Symbol | |
|---|
| ID | 3694151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 2129589 |
|---|
| End bp | 2131337 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637731999 |
|---|
| Product | RemN protein |
|---|
| Protein accession | YP_336902 |
|---|
| Protein GI | 76819608 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCTT TATTGCTTTT TCATGCAATA AAGATGAATT TCTGTGGCAA TGACTTGCAA
CAGCCGCTCA GCCTAACATG CCGCTCTCCC CTTCGCATCA CGGTGTCCGG CATGCACGAC
GCGCCCTCCC GCCCCGCTCC GATCGAGCCT CCCCGTCACG CTTGCGGCTC GCCCGCCGCG
TCCGCACCGG CCCGCGCCCG CGCTCTCGCG CCCGCCGCCG AGCCCGGCGC CGAAGCGCCG
TCGCGCGCGT GGCGCGCGCT CGCGACCGCG TCGGCCACCT GCTCGCTGAT CGTGCTCGAC
ACGAACGTCG TCGCCGTATC GCTGCCATCG ATCGCCCGTA CGTTCCATGC GAACTTCGCG
GACATCGAAT GGGTGGTGAG CGCGTACATG ACCGCGTTCG CCGCATGCCT GCTGCCGGCG
GGCGGGCTCG CCGACCGCGC GGGCCGCAAG CGCGTGCTGC TCGCCGGGCT CGCGGTGTTC
TTCGTCGCGT CGCTCGGCTG CGGGCTCGCG CCGTCGGCCG CGCTCCTGAA TGTCGCGCGC
GCGGTCAAGG GCATCGGCGC CGCGATGCTG CTGACCTCAG CGCTCGCCGT GATCGCGAAC
CGCTTCTCCG AAGGCCGCGA GCGCGCGCGC GCGTGGGCGA TCTGGGGCAT GTGCATGGGC
GTCGCGACGG CGATCGCGCC GCTCGTCGGC GGCGCGATCG CGCAATGGAT CGGGTGGCGC
TGGATCTTCC TGCTGAACCT GCCGGTGTGC ATCGCGCTCG CCGCGGCCGT TCGCGCGACG
ATCGACGAAT CGCGCGATCC GCACGCGAAA CGCATCGACG CGCCGGGCAG CGTGCTGTTC
GGCGCGGCGC TCGCGCTCGG CATCTGGGCG CTGATCGACG CGCCGTCGCA CGGCTGGACC
GCGCCCGGCA CGCTCGCGCG CTTCGCGGCG AGCGCGGCGC TCGGCGCGGC GTTCGTCGCC
GCCGAGCGCT GGCAGCGGCG CCCGATGATC GATCTCGCGC TGTTTCGCAC GCCGCGCTTC
GTCGGCGCGC TGCTCGCGAT GTTCGGCTAC GCGGCGTGCG CACAGGTGAT GATGACGTTC
CTGCCGCTCT ATCTGCAGAT CGGCTTCGGG ATGTCGGCGA TCGACGCGGG GCTCGGCATG
CTGCCGTTCG CGCTCGCGAT GATCGTCGGG CCGTCGCTCG GCGCGGCGCT GTCGGCGCGC
GCGCCGGCCG CGACCGTGCT CGGCTGCGGG CTCGCGCTGA TCGGCATCGG CAATTTCGCG
ACCGCCGCGC TCGCCGGCGC GTCGCACTAC GGTCTCGTCG CGCTCGGGAT GATGATCACC
GGCTGCGGCG CGGGCATCCT CAACGGCGAC ACCCAGAAGG CGATCATGGC GTGCGTGCCG
CCCGAGCGCA CCGGCATGGC GTCCGGGATC AGCACGACGA CGCGGTTTTC CGCGATCGTG
ACGTCGGTCG GCGTGCTCGG CGCGGTGCTC GCCGAGCAGA CCCACGCGGC GCTCGCCGCA
CGCGTCGCGC ATGCGCCGGC ATTGCTCGGC GCGCTCGATC CGCGTTTCAT GTCGAGCCTG
CTCGCGGGCG ATCTCGCGCA GGCGATACGC GGCCTGCCGC CGCGCACCGG CGCGACGTTC
GCGCACATCG CGCCCGGCGG CTTCGCGAGC GGTTTTTCGC TCGCGCTGTG CGCGAGCGGC
GCGTTCGCGC TCGCGGCGGC CGTGGCGGTG CGGCTGCTCG TCGGCGCGCA GCCGGGGCGC
GCCGCATGA
|
|---|
| Protein sequence | MAPLLLFHAI KMNFCGNDLQ QPLSLTCRSP LRITVSGMHD APSRPAPIEP PRHACGSPAA
SAPARARALA PAAEPGAEAP SRAWRALATA SATCSLIVLD TNVVAVSLPS IARTFHANFA
DIEWVVSAYM TAFAACLLPA GGLADRAGRK RVLLAGLAVF FVASLGCGLA PSAALLNVAR
AVKGIGAAML LTSALAVIAN RFSEGRERAR AWAIWGMCMG VATAIAPLVG GAIAQWIGWR
WIFLLNLPVC IALAAAVRAT IDESRDPHAK RIDAPGSVLF GAALALGIWA LIDAPSHGWT
APGTLARFAA SAALGAAFVA AERWQRRPMI DLALFRTPRF VGALLAMFGY AACAQVMMTF
LPLYLQIGFG MSAIDAGLGM LPFALAMIVG PSLGAALSAR APAATVLGCG LALIGIGNFA
TAALAGASHY GLVALGMMIT GCGAGILNGD TQKAIMACVP PERTGMASGI STTTRFSAIV
TSVGVLGAVL AEQTHAALAA RVAHAPALLG ALDPRFMSSL LAGDLAQAIR GLPPRTGATF
AHIAPGGFAS GFSLALCASG AFALAAAVAV RLLVGAQPGR AA
|
|---|
| |