Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1703 |
Symbol | |
ID | 3692623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 2079932 |
End bp | 2082259 |
Gene Length | 2328 bp |
Protein Length | 775 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637731957 |
Product | Rhs element Vgr protein |
Protein accession | YP_336860 |
Protein GI | 76818495 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAATT TTTCCGCCGC CCGCACCGTG ACGGTGAGCG GCCCTGCCGT GCCGACGACG CCCGTCGGCG AGCCCGCGCT CGAACTGAGC GCGATCCGGG GCGACGAAAC GCTATCGGAG ATCTATTCGT ACACGCTCGA TTGCCTGACG CCGCCGGACC CGTTGCTCGC GCACGAGCGG GCCGCGAATC TCGATCTGAA GGCGATGATC GGCAAGGCGC TGACCGTGAC CGTGCAGCTC GAAGGCATGG GCTCGTTCGT GCCCGGCATG CCGGGCATGG CGGGCGCGGC CAATATCGGC GCGGGCGCGC GCGAGATCAG CGGCATCGTG ACCGGCGCGC GCTTCGAGGG CCAACTGAAC CGGCAGTGCC GCTACCGGCT GACGATGCGG CCGTGGATCT ACCTGGCCGA CCTGCGCTCG GACTACCGGA TTTTCCAGAA CCGGAGCGTC GACGAGATCG TCGACGAAGT GCTGAACGCG TATTCGTACT CGTACGACAA GCGCTTGAGC GGCCGGTATC CGAAGCTCGG CTACCAGGTG CAGTACGGCG AGACCGATTT CGCGTTCATC CAGCGGCTGA TGCAGGAGCA CGGCATCTAC TGGTTTTTCG AGCATACGAA CCAGGTGCAC CGGATGGTGC TCGTCGATCA CCTGGGCGCG CACAAGCCGG TGGAGAGCGC CGCATACCGC ACGCTGCGCT ACTACCCGCC GGGGCACAAG ATCGACGCCG AGTACATCGA CAGGTTCAGC ACCGAGGAGC ACATCCGGCC GGGCCGCTGG GCGACGGGCG ATTTCGATTT CGAGAAGCCG AACGCGGACC TGGGCGTCGA GAACGCGCTG CCGCGGGACA CCGCGCACAA CGGGCTCGAA CGTTACGAGT GGCCGGGCGA CTACACGGCG CGCGAGCACG GCGAGCACCT CGCGCGCGTG CGCATGGAAC AGACGCGCGC GCGGGGCGAG CGCGCATCGG GCGGCGGCAA CGTGCGCGAC ATCGTGTGCG GCACGACATT CGCGCTCGCG GGCCATCCGC ACGCGAGCGC GAACCGCGAG TATCTGGTGA TCGGCGCGAC GTTCGAGGCG ACGGAGACGG GCGGCGCGTC GGGGCCGGGC GCATATCGGA TCGACACGTC GTTCGTCGCG CAGCCGGCGA CCACCGCGTT CCGGCCGCCG CGCACGGTGC GCAAGCCGCG CACGCGCGGG CCGCAGACGG CGATCGTCAC CGGCCCGCGA GGGCAGGACA TCTGGACGGA CCAGTACGGC CGTGTGAAGC TGAAATTCCA CTGGGACCGT TCGCTCGTCG ACGATCAGAA CTCGTCGTGC TGGGTGCGCG TTTCCTATGC GTGGTCGGGC AACAATTACG GCGGCGTCAA TATTCCGCGC GTGGGCTCCG AAGTGGTCGT CGATTTCGAG CACGGCGACC CGGACCGGCC GCTCGTGACG GGGCAGGTAT ACAACGCGCT GCACATGCCG CCGTGGCCGT TGCCGGAGAA CGCGACGCAA AGCGGCTTCA TGACGCGCTC GCCCGCGGGC GGCGGCGAGA ACGCGAACAT GCTGCGCTTC GAGGACAAGG CGGGCGAGGA GCAGGTCAAG CTGCATGCGG AGCGCAATTA CGACGTATCG GTCGAGCGCG ACGCGACGAC TGCCGTCGGG CGCAAGCACC TGACGCTCGT CGGCGTCGAC CTGATGCCGG TGATGTCGAC GCGCTCGCCG CTGGAGCGGC TGATCGACCT GCTGCGCACG GGCGGCGCGG CCAGCCCGGC GGCGTCGGGG CAGCCGGCGG CGGCTTCCCG GCAACCGTCG GGACAGCAGC AGCAACATCA ACAGCAACAC CAGCAACATC AGCGGCAACA CCAGCCCTAT CAGCAGTTGA AGCAGCAGCG CCAGATGCAG CGCGCGGGCG GATGGCAGGC GCTCGCGGCG AACGTCGCGA AGACGTTGCA GGAAATCGTG GCGGTGCTCA CGGACCCGTT CGTCACCGCG TCGGTGAGCA CCGTGCAGGG CGCGTCGACG TCCGTCGTGT TCGGCGACGC GAAGGGCGTG CACGTGGGCG ATACCGTCAA GATCACCAGC GGAGACGCGC ATTCGGAGGT CAACGGCACG GCATCGTCGA AGGACGTGAA CAGTGTCTCG CTGAAGGGCA CGTCGACCAG CCTGACCGGG GTGAGCACCT CCGAAACGGG GACGAACATC GTGACGACCG GACTCACGGT ATCAACGACC GGCGCGAGCG TTTCGACGAC CGGATTCAGT GCGACCGAAA CGCTCGTGCA GGTCGCCAAG AAGACGCAGG AATGCGAATT CATCAAGGGC ATCAAGATCT CGATGTGA
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Protein sequence | MPNFSAARTV TVSGPAVPTT PVGEPALELS AIRGDETLSE IYSYTLDCLT PPDPLLAHER AANLDLKAMI GKALTVTVQL EGMGSFVPGM PGMAGAANIG AGAREISGIV TGARFEGQLN RQCRYRLTMR PWIYLADLRS DYRIFQNRSV DEIVDEVLNA YSYSYDKRLS GRYPKLGYQV QYGETDFAFI QRLMQEHGIY WFFEHTNQVH RMVLVDHLGA HKPVESAAYR TLRYYPPGHK IDAEYIDRFS TEEHIRPGRW ATGDFDFEKP NADLGVENAL PRDTAHNGLE RYEWPGDYTA REHGEHLARV RMEQTRARGE RASGGGNVRD IVCGTTFALA GHPHASANRE YLVIGATFEA TETGGASGPG AYRIDTSFVA QPATTAFRPP RTVRKPRTRG PQTAIVTGPR GQDIWTDQYG RVKLKFHWDR SLVDDQNSSC WVRVSYAWSG NNYGGVNIPR VGSEVVVDFE HGDPDRPLVT GQVYNALHMP PWPLPENATQ SGFMTRSPAG GGENANMLRF EDKAGEEQVK LHAERNYDVS VERDATTAVG RKHLTLVGVD LMPVMSTRSP LERLIDLLRT GGAASPAASG QPAAASRQPS GQQQQHQQQH QQHQRQHQPY QQLKQQRQMQ RAGGWQALAA NVAKTLQEIV AVLTDPFVTA SVSTVQGAST SVVFGDAKGV HVGDTVKITS GDAHSEVNGT ASSKDVNSVS LKGTSTSLTG VSTSETGTNI VTTGLTVSTT GASVSTTGFS ATETLVQVAK KTQECEFIKG IKISM
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