Gene BURPS1710b_A1693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1693 
Symbol 
ID3692598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand- 
Start bp2067293 
End bp2067778 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content63% 
IMG OID637731947 
Producthypothetical protein 
Protein accessionYP_336850 
Protein GI76819777 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.792973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAGG ATATTTTTCT GAAGATCGAC GGCATCAACG GTGAATCCCT CGACGACAGC 
CACAAGGACG AGATCGAAGT CCTGAACTGG AACTGGGAGA TTCAGCAGGA ATCGACGATG 
CACACGGGCA GCGGCGGCGG CGCCGGCAAG GCGAGCGTGA AGGATCTGAC GTTCGAGCAC 
GCGATCGACC GCGCGAGCCC CAACCTGATG AAGTACGCGC TGACCGGCAA GCACGTCGAT 
CAGGCGGTGC TCGTGATGCG CAAGGCGGGC GGCAATCCGC TCGAATACCT GAAGCTCACG 
ATGAGCGACG TGATCATCAC GCGCGTGCGG CCGTCGGGCA GCCGCGACGA CACCGAGCGC 
AGCCGCGAGA CGGTATCGCT GTCGTTCGCG AAGGTGAAGC AGGAGTATGT CGTGCAGAAC 
GCGCAGGGCG GCAGCGGCGG CGCCGTCACG ACGAGCTTCG ACATCAAGGG CAACAAGGAA 
ACCTGA
 
Protein sequence
MAQDIFLKID GINGESLDDS HKDEIEVLNW NWEIQQESTM HTGSGGGAGK ASVKDLTFEH 
AIDRASPNLM KYALTGKHVD QAVLVMRKAG GNPLEYLKLT MSDVIITRVR PSGSRDDTER 
SRETVSLSFA KVKQEYVVQN AQGGSGGAVT TSFDIKGNKE T