Gene BURPS1710b_A1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1660 
SymbolopcP 
ID3692689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand- 
Start bp2030072 
End bp2030701 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID637731914 
Producthypothetical protein 
Protein accessionYP_336817 
Protein GI76819127 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGCG GCTTCGCGAA CGATCGCCTC TACGGCGCGG CGCTGCAATA CCAGCGCGGC 
GGCCTGACGG TCGGCGCGTC GTACCCGAAG ATGAACCGCG CGCGCAGCGC GGATGCCGCG 
GGCGCCGTCA CGGGCGACAA CACGTTCGAC GCATCGTCGC AGCGGAACGT CGGCATCGGC 
GCGACCTACG CATTCTCGAA GGCGCTGATC GGCTTCGCGT ATTCGCACGT CGACGTCTAC 
GATCCCACCT CGAACGCATA CTTCACCGGT ACGACGCGGC CCGCGGGCGA GCACTGGCAA 
TCGTGGAAGT TCGACCACTT CGAGATCAAC GGCCGCTATC GCGTGACGCC CGCGTTCTAC 
GCCGGCGCCG CGTACACGTA TACGCAGGCG CGCGCCGATT CGACGGCCGG CGCATTCCAT 
CCGAAGTGGC GCCCACTGAG CACGAAGCTC GACTACGATC TGTCGAAGCG CTCGTCGGGG 
TTCGCCGAAG GCGTCTACCA GCACGCGCAG CACGCGATGA ACGCGCGCAC GGGCACCGGT 
TTCGACCATG CGTACATCCC GGGCGCGGCG AATATCGCGT CGGGACCGAA CCGGTACGTC 
GTGCGGCTCG CGCTGCCGCA CCCGTTCTGA
 
Protein sequence
MAGGFANDRL YGAALQYQRG GLTVGASYPK MNRARSADAA GAVTGDNTFD ASSQRNVGIG 
ATYAFSKALI GFAYSHVDVY DPTSNAYFTG TTRPAGEHWQ SWKFDHFEIN GRYRVTPAFY 
AGAAYTYTQA RADSTAGAFH PKWRPLSTKL DYDLSKRSSG FAEGVYQHAQ HAMNARTGTG 
FDHAYIPGAA NIASGPNRYV VRLALPHPF