| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1658 |
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| Symbol | |
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| ID | 3693782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 2025166 |
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| End bp | 2027811 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637731912 |
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| Product | putative amylase |
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| Protein accession | YP_336815 |
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| Protein GI | 76819424 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCAA GGCACTTCGG ATTCAAGCAG GCGGTGCTGG TGGGCAGTCT GGCCGCGCTC
GCGGGCGCGG CGGCCCTACC GGCGAATACT TCGGCTGCCG AAGCATTCGG CTCGCCCGGC
GCCGCGCCCG TGCGGGGCCC GGCGGCCAAG TCGTTCCTCG GCACGGCGGT CAACGGCGCA
TCGCGGGTGT ACTTCACCGG TTATCGCGGC ATCCTGTCCG AGGTCTACTA CCCGGTCCTC
GATACGCCCG AGTCCGTCGA CCTGCAGTTC CTCGTCGGCG ACGCCGGCAA GACCTTCGTC
GACGAAGAAA AGCAGCAGGC CTACTCGGCC GCGCAAACGG ACACGCGCAC GATGAGCTGG
CAGGTGACGA CCGGCAACAG TTCGCACAAC TGGCAAATTC GCAAGATCGT CTTCGCCGAT
CCGAACCACA ACGCGATCGT GCAGCGCGTC ACGTTCACCG CGCTCAACGG CCGCAAGGTG
GGCGACTTCA ATCTCTACAT GCTGTCCAAG CCGTACCTCG ACAACGCCGG CGCCAACAAT
ACCGCGCAAA CGGTGTCCGG CAGCGGCGGC ACCGCGCTCG TCGCGAATCA CAACAGCCGC
TATTCGGCGC TCGTCGCGAG CCGCCCGTGG AAGGTGGTCA ACGGCGTGGG CATGACGTCG
AACGGCTTCG TCGGGCAGAG CGACGGCTGG ACCGACCTGC TCGGCGGCAC CGCCGACAAG
ACGATGGACT GGACCTTCTC GTCCGCGACC AACGGCAACG TCGCGCAGAT GGGCTGGCTC
GACCTCGGCG ATCCGAGCGC GACGAGCGTG TCGTTCGACG TCGTGCTCGG CTTCGGCGGC
ACGCAGGACC AGGCGCTCGG CGACGCGAAC ACGGTGCTCG GCAGCGATCT CGCCGGCGAG
CAGCAGCAGT ACGACACCGG GTGGCATAAC TATGCGGCGG GCCTGTCGTC GCAGAACGGC
GCCGCGGACG ACGGCTACTA CCTGGCCGCG ATGACGCTCA AGACGATGCA GGACAAGAGC
AACGGCGCGA TGATCGCCGG CATCGGCACG CCGTGGGGCG AAACGCAGGG CGATGCGAAC
GCGGGCGGCT ATCACCTCGT GTGGCCGCGC GACCTGTTCA AGTTCGCGAA CGCGCTGACG
ACGGCGGGCG ACACGTCGAG CGCGACGAGC GTCGTCAACT ACCTGTTCAA CACGCTGCAG
CAGACAACCG ATTGCGGCAC CGCCGAATAC AACGCGCCCG GCTGCGCGCA GGGCTACAGC
CGCGTCGGGC GCTTTCCGCA GAACGCATGG GTGAACGGCT GGCCGTACTG GCAGGGCACG
CAGATGGACG AGCAGGCGAT GCCGATCATC CTCGCGTGGC GCCTCGGCCC GAGCGTGTTC
AATCCGCTGT GGCCGAAGAT CAAGCTCACC GCCGACTACA TCGTCAATAC CGGCCCCTGG
ACGTACCAGG AGCGCTGGGA GGAGAACGCC GGCTATTCGC CGTCGACGAT CGCCGCCGAG
ATCGCGGGCC TCGTCACGGC GGCCGATATC GCGACGCAAA ACGGCGACAC GGCGAGCGCC
GCGCGCTACC TCGCCGCGGC CGACTACTGG CAGGAGAACG TCGCGGCGTG GACGTACACG
TCGAGCGGCG CGTTCGGCAA CGGCAGCTAC TACATCCGGA TCAATCCGGC GGGCCGCGCG
GGCACCGGCA CCGACCGCGC GAGCTTCGCG CCGACCGCCG GCCCCGACAC GCCGCAGACG
CTGAGCGTGA AGAACGGCGG CGGCAGCCAC GACGCGCGGC GCGTCGTCGA CGGCGGCTTC
TTCGAGCTCG TCCGGATGGG GGTCAAGCGC GCGACCGATC CGACGATCGC CAACACGATC
TCGGTCTACG ACAGCGTGCT CGGCCAGACG CTGAACGTCG CGAACGCGCC GGCGCTGTCG
CCGAACGCGT GGTTCCGCTA CAACTTCGAC GGCTACGGCG AGCACAACGA CGGCGGCGAT
TTCGACGGCA CCGGCGCCGG CCGGCTGTGG CCGATCTTCA CCGCCGAGCG CGGCATGGTC
GAGATCGCGC GCCAGGGCAG CGGCGGCGCG GGCAGCGCGT ACTTCTCGAC GCTCAAGCAA
TTGACGACGC CCGAGGGCTT CGTGCCGGAG CAGGTGTGGT CGAATTCGAC GACGCTGCCC
GACGGCTGGG CGGTGACGAC GCCCGCGGGC TACACGCCGG GCCAGCCGAC CAAATCGATG
GCGCCGCTCA ACTGGGCGAT GGGCGAATAC ATCAGCCTGC TCGCGTCGAT CCAGGCGGGG
CGCATCGTCG ACGTGCCGTC GGTGGTCTGC GCGCGCTACA ACAACTGCGC CGCGCCGCCG
CAAAGCGGGC AGGTGCCGGT GGCCGTCAAC GTGAACGCGA GCACGCAGCT CGGCCAGCAG
ATGTACGTGA CAGGCAACGT CGCCGCGCTC GGCAATTGGA ACACCGATCT CGGCATTCCG
GTCGATCCGG CCAGCTACCC GGTGTGGCGC AACACCGTCA ACCTGCCGGC CGCTCAGGCG
ATCCAGTACA AGTACTACCG GAAGAACGCG GACGGCAGCG TGACGTGGGA GAACCGTTCC
GGCAACCGCC AGCTTCAGAC GCCCGCGAGC GGCACGTTGG CGCTGAACGA TCAGGTGAGC
TGGTGA
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| Protein sequence | MSARHFGFKQ AVLVGSLAAL AGAAALPANT SAAEAFGSPG AAPVRGPAAK SFLGTAVNGA
SRVYFTGYRG ILSEVYYPVL DTPESVDLQF LVGDAGKTFV DEEKQQAYSA AQTDTRTMSW
QVTTGNSSHN WQIRKIVFAD PNHNAIVQRV TFTALNGRKV GDFNLYMLSK PYLDNAGANN
TAQTVSGSGG TALVANHNSR YSALVASRPW KVVNGVGMTS NGFVGQSDGW TDLLGGTADK
TMDWTFSSAT NGNVAQMGWL DLGDPSATSV SFDVVLGFGG TQDQALGDAN TVLGSDLAGE
QQQYDTGWHN YAAGLSSQNG AADDGYYLAA MTLKTMQDKS NGAMIAGIGT PWGETQGDAN
AGGYHLVWPR DLFKFANALT TAGDTSSATS VVNYLFNTLQ QTTDCGTAEY NAPGCAQGYS
RVGRFPQNAW VNGWPYWQGT QMDEQAMPII LAWRLGPSVF NPLWPKIKLT ADYIVNTGPW
TYQERWEENA GYSPSTIAAE IAGLVTAADI ATQNGDTASA ARYLAAADYW QENVAAWTYT
SSGAFGNGSY YIRINPAGRA GTGTDRASFA PTAGPDTPQT LSVKNGGGSH DARRVVDGGF
FELVRMGVKR ATDPTIANTI SVYDSVLGQT LNVANAPALS PNAWFRYNFD GYGEHNDGGD
FDGTGAGRLW PIFTAERGMV EIARQGSGGA GSAYFSTLKQ LTTPEGFVPE QVWSNSTTLP
DGWAVTTPAG YTPGQPTKSM APLNWAMGEY ISLLASIQAG RIVDVPSVVC ARYNNCAAPP
QSGQVPVAVN VNASTQLGQQ MYVTGNVAAL GNWNTDLGIP VDPASYPVWR NTVNLPAAQA
IQYKYYRKNA DGSVTWENRS GNRQLQTPAS GTLALNDQVS W
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