| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1621 |
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| Symbol | |
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| ID | 3692441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 1977939 |
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| End bp | 1979819 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637731875 |
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| Product | hypothetical protein |
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| Protein accession | YP_336778 |
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| Protein GI | 76818079 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCCGC AGTTTCTCGA TCACTACAAC CGCGAATTGA CCTACATGCG GGAGTTGTCC
GCGGAATTCG CGGCGCAACA CCCGAAGATC GCGCGCCGAC TCGGCATGCA AGGCATCGAA
GTGGCGGACC CGTACGTAGA ACGGCTCATC GAGGCGTTCT GCTTCATGTC CGCGCGCACG
CAACTCAAGC TCGAGGCCGA GTTCCCCCGC TTCACGCAAC GCCTGCTCGA AGTCGCCTAT
CCGAATTACG TCGCGCCGAC GCCGTCGATG GCCGTCGCGC GCCTGCGTCC AAGCCTGCGG
GAAGGCGACT TCAGCAAGGG GTTCAAGGTT CCGCGTCACA GCATGCTGCG CTCGTCGATC
CCGCCCGGCG AGCAGACCGC ATGCGAATTC CGCACCGGCC AGGACATCAC GCTCTGGCCC
ATCGAGATCG CCGGCGCGAC GCTGACCGCC GTGCCGCCCG ATCTTCCGGA TCTTCAGCGC
AGCCTGCTGC CGCACACGAA GCTGCGCGGC GCACTCCGGC TGCGCGTGCG CACCGTCGGC
GAAATCAGGT TTTCGCAAAT TACCGGGCTC GATCGCCTCT CGCTGTATAT CGGCGGCGAC
GAACGCATCG CCTCCCATCT TTTCGAGCTG ATTCACGCGA GCAGCGTCGC GTCGGTCGTG
CGCGCGCCGG GCGCCGCGCG CGGCGAAGGC GCCGTCGTCG CGAAGAATGC GGTCGACTTC
GAAGGCCTGT CGCCCGATCA AAGCCTGTTG CCGCTCGTCT GGAATACGTT CCACGGGCAC
AATCTGCTGC ACGAATACTT CACCTGCCGT CAGCGCTTCT ATTTCTTCGC GCTCACGCAA
TTGAACGCCG GCTTGTCGCG CATCGACGGA AAGGAAGCCG AAATCGTGCT GTTGCTCGAC
CGCTTGCCCG ACGAGCTCGT CACGCACGTC GAGGCCGCGC GCTTTCTGCT GTTTTGCGCC
CCCATCGTCA ATCTGTTCCC GAAGCGGACC GACCGGGTGG AAATCAATCG CGCCCAAACG
GCTTTCCACC TGATACCGGA CCGCACCCGC CCGCTCGATT ACGAAGTATT CTCGGTGTCG
CGCGTGTTCG GGCAAAAAGC CGAGACGTCG ACGGAAGTCA CGTTCAATCC GCTCTATCAG
ACGCTGCATA GCGACATCGG CAATTACGGC CGGTATTTCT CGATCCTGCG CGAACCCAGA
ACGACATCGA CCAACGCGCG TAAATATGGA ACGCGCACGC CATACGTCGG AACGGAAGTC
TACGTGTCGC TCGTCGACCA GGCCGAAGCG CCGTACGCCG ACGACATTCG TTACCTGTCC
GTCGACGCAT GGGTCACCAA CCGCGATCTG CCCCGACTGA TCCCGCGCAA CGGCGTCAAC
GATCTGACGA TGCAAGACTC CGTGCCGATC GAGGGCGTGA GCCTCGTCCA TCCGCCGAGC
GCGCCGCGCG AGCCGTACGC GACCGGCGAA ACCGCGTGGC GGCTGATTCG CCAGCTCAGC
TTCAACTACA TGCCGCTTGC CGAGCTCGAC CACCGCGACG GCGGGCAAGC ACTGCGCAAC
ATGCTGCGCC TCTTCGTCGG CACGAGCGAG CGCGAACAGG CCACGCAGAT CGACAGCCTG
GTCGGCGCGC GCACGGAGCC TGTCGTCCGC CGTCTGCCCG GCCACGGATT ACTGGTTTAC
GGGCGCGGCG TCCGGTGCGA GCTGACCGTC GACGAAAGCG GCTTCTCCGG GTTGAGTCCA
TACCTGTTCG GTCTCGTGCT CGAGCAATAC CTCACGCGCC ACGTCTCGAT CAATGTGTTC
ACCGAGACGG AGCTTCGCTC GATGCAACGC GGCCTCGTCA CGCGCTGGAA ACCGCGCATG
GGCGGAAGGG GCGCGGTATG A
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| Protein sequence | MDPQFLDHYN RELTYMRELS AEFAAQHPKI ARRLGMQGIE VADPYVERLI EAFCFMSART
QLKLEAEFPR FTQRLLEVAY PNYVAPTPSM AVARLRPSLR EGDFSKGFKV PRHSMLRSSI
PPGEQTACEF RTGQDITLWP IEIAGATLTA VPPDLPDLQR SLLPHTKLRG ALRLRVRTVG
EIRFSQITGL DRLSLYIGGD ERIASHLFEL IHASSVASVV RAPGAARGEG AVVAKNAVDF
EGLSPDQSLL PLVWNTFHGH NLLHEYFTCR QRFYFFALTQ LNAGLSRIDG KEAEIVLLLD
RLPDELVTHV EAARFLLFCA PIVNLFPKRT DRVEINRAQT AFHLIPDRTR PLDYEVFSVS
RVFGQKAETS TEVTFNPLYQ TLHSDIGNYG RYFSILREPR TTSTNARKYG TRTPYVGTEV
YVSLVDQAEA PYADDIRYLS VDAWVTNRDL PRLIPRNGVN DLTMQDSVPI EGVSLVHPPS
APREPYATGE TAWRLIRQLS FNYMPLAELD HRDGGQALRN MLRLFVGTSE REQATQIDSL
VGARTEPVVR RLPGHGLLVY GRGVRCELTV DESGFSGLSP YLFGLVLEQY LTRHVSINVF
TETELRSMQR GLVTRWKPRM GGRGAV
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