Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1620 |
Symbol | |
ID | 3693636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 1976893 |
End bp | 1977942 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637731874 |
Product | hypothetical protein |
Protein accession | YP_336777 |
Protein GI | 76818593 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGCGC ATCCGCCCGC CGCCCGGCCC ATCGACGCCC ACTCGCCCCT GCATCCGGAC GCACTGCGGG CATGGTTCGA TCCGCAAGCG CCGTGGCGCG CCGGCTTTCT GAGCCTGTTG CGCGCAATCG CCGCACGCGA CACGCGCATG CCCTTGCCCG GAACGGCGTG TCTGCCGAAG GAAGAGGCGT TTCGCATCGG ACAACGGCCG TCGATGGCCT TCGCGCCGCG CGAGATCGCA TCGCTCGACG TGCAGCGCGG GCGTCTCGAC ATTCAGCTGT TCGGCCTCGG CCTATGGGGG CCGCAGGGGC CGTTGCCGCT TCACATGACC GAGCTCGCGT ACAACCGCGC CGAGAGCTAT CAGGATCATG CGATCGCGCA TTTCTCCAAT CTCTTTCACC ATCGTGCGCT CGCGTTGTTC TATCGTGCGT GGGCGTCGTC ACAGGCGACC GTATCGCTCG ATCGCGCCGA GCACGAAACG TTCTCGTTCT ATATCGGCAG CCTGATGGGC ACCGATCCCG AAGAAGCCGC GCGCACGCAC CCGCCCACGC ACGCGCGGTA CGCCGCATGC GCGCATCTCG TGCGCGAGGC GCGCAATCCG GACGGCGTGG CCGCCACGCT GTCGCATTAC TTCGGCGTGC CGATCGCCGT CGACGAATAC GTCTTCCACT GGATCCGGAT TGCGCCGCCG GAGCGTTGCC TGCTCGGCGC GCGCGCCGCA TCGACCGTCA TGGGCGAGGG CGCGCTGCTC GGCGACATGG TTGCCGATTG CCAGCACAAG TTCCGGCTCG TCATCGGCCC GCTCGATCTC GACCAATATC TTCGCCTGAC GCCGCACGGC AACGATCTGC CGACCCTGGT CGATTGGGTG CGCGCCTTCG TCGGTCACGA ATACGACTGG GAGATCAAGC TGCTCGTCAA GCCGCGCGCC GCGCCGCCCG CCCGCGCGGA TACCACGCAC CGCCTCGGCT ATTCGACCTG GCTCGGCGAA TCGAGGGACG ACAGGCCGGT CGTCGGCATG GTGTTCGAGC CGGAAAAATA CTGTTCCTGA
|
Protein sequence | MTAHPPAARP IDAHSPLHPD ALRAWFDPQA PWRAGFLSLL RAIAARDTRM PLPGTACLPK EEAFRIGQRP SMAFAPREIA SLDVQRGRLD IQLFGLGLWG PQGPLPLHMT ELAYNRAESY QDHAIAHFSN LFHHRALALF YRAWASSQAT VSLDRAEHET FSFYIGSLMG TDPEEAARTH PPTHARYAAC AHLVREARNP DGVAATLSHY FGVPIAVDEY VFHWIRIAPP ERCLLGARAA STVMGEGALL GDMVADCQHK FRLVIGPLDL DQYLRLTPHG NDLPTLVDWV RAFVGHEYDW EIKLLVKPRA APPARADTTH RLGYSTWLGE SRDDRPVVGM VFEPEKYCS
|
| |