Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1613 |
Symbol | |
ID | 3694072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1967052 |
End bp | 1969628 |
Gene Length | 2577 bp |
Protein Length | 858 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637731867 |
Product | Rhs element Vgr protein |
Protein accession | YP_336770 |
Protein GI | 76817637 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAACC ATTTTTCGAA CGGACGGACG AATCAAAGCC GCACGGTAGT GATCCGCAGC GGTGCGATGC CGCGGCTGCT CGGTCAGCCC GCGCTCGAGT TCCTGTCGCT GCGCGGTGAA GAGCACCTCG GAAAACTCTA CACGTACGAA TTGCTCCTGC GCACGCCGGA CGATTTTCAT GTGCCGTTGG CAACGAGCGC GAATCTCGAC CTGAAGGCGA TGATCGGCAC GGAGATGACG GTCTGCATTC AGCTCGACGG AATCGGGACG GGCGCGCAAG GCGGCGTTGG CGCGGGTGCG CGCGAAATCA GCGGGCTCGT GGTCAAGGCG GGCTTCCTGC GCTGCGAGGG GCGCTATAAC GTCTATCGCA TCGAGCTGCG CCCCTGGCTG TGGCTCGCGA CTTTGACGAG CGACTACAAG ATTTTTCAGG ACAAGAGCGT CGTCGAAATC ATCGATACGG TCTTGCACGA TTACCCTTAC CCGGTCGAGA AGCGGCTCGA CATCGACAAG TATTCGGTGG CGGGCGAGAG CGCTCGAAAC GAGCCGCGCG CGTTCCAGGT GCAATATGGC GAAACCGATT TCGACTTCGT TCAGCGTTTG ATGGAGGAGT GGGGGATCTA CTGGTTCTTC GAGCATTCGG ACAACAAGCA TCGCCTGGTC TTGTGCGATC ACATCGGCGG ACATCGCAAG GCGCCGAGCG AGGCCTATCA CGAGATCGCG CATCACCCGG AAGGCGGGAA GATCGACATC GAGTACATCA ACTATTTCTC GACGGACGAA GCGCTGCGGC CCGGCCGCGT CGTGATAGAC GATTTCGACT TCACGCGTCC GCTCGCGAGC CTCGTCACGT CCAATCACCA GCCGCGGGAG ACGAACTGGG GGGAGGGCGA GCTGTTCGAA TGGCCGGGCG ACTATACCGA TAGCAAGCAT GGCGATCTCA TCAGCCGCGT GCGCATGGAA GAGCGCCGCG CGACCGGGTC GCGCGCATAC GGTCGGGGCA ACGTGCGCGG CCTCGCCTGC GGTCATACGT TCGTGCTGTC GAAGCACAAG CACGACGGCG CGAACCGCGA GTACCTCGTC ATCGAATCGG CGTTGATGCT GACCGAAGTC GCGGACGAAA CGGGCAGCGG CTACCGCTAC GAATGCGATA ACGAACTGGT CGTGCAGCCG TCGAACGAGG TGTTTCGAAT GCCGCGCGAA ACGCCCAAGC CGACGACGAG CGGGCCACAG TCCGCGATCG TGGTCGGGCC GCCGGGCCAC GAGGTATGGA CCGACGAATT CGGCCGCGTG AAGATCCGTT TTCTGTGGGA TCGCTACGCA CGCAATGACG CAACGGATTC CTGCTGGGTA CGCGTGAGCC AGGCGTGGGC CGGCGTGAAC TTCGGCGGCA TCTACATTCC GCGGATCGGA CAGGAAGTGA TCGTCGGATT CATGAACGGC GATCCGGACC GTCCGCTGAT TCTCGGCAGC CTCTACAACA CCATTACGCC GCCGCCTTGG GATCTGCCCG GCGACGCGAC GAAGAGCGGA TTCAAGAGCA AGTCGATCAC GGGCGGGCGC GAGAACTATA ACGGCATCCG CTTCGAGGAC AAGCTGGGGG CCGAGGAATT TCACATGCAG GCGGAAAAGG ACATGAACCG CCTGACGAAG AACGACGAGT CGCATACGGT CGGCGCGAAT TTTTCGATCG GCGTCGGGCT TACCCATACG CGCGCGGTGG GCGCCATGTT CAGCAGCATC GTCGGCGGAG CCGCCAGCTA TGCGGTGGGG GGCGCGGAAT CGACGATGAT CGGCGGCGCG TATGCGTTGA ACGTCGGCGG CGCGCACGCG GTTGCGGTGG GCGGCGCGTC GTCCGTTTCC GTTGGCGGCG CCTACGCGCG CAACGTGGGC GGCGCGTATG CGCTGACAGT CGGCGGCGTG CTGTCGATCG TCTGCGGTGC GTCTTCGATC ACCATGACGG CTTGCGGCTC GATCAAGATC GTCGGCAAGA ATATTCGCAT CATCGGCAGC GACGAAGTCG TCGTGCAAGG CGCGCCCCTG CAACTGAATC CGGGCGATTC GGATTGCGGC GGAGGGGGCG GCGGCGGCGG CGGCGGCGGC GCGATTCCGC CGATTCCGTT GCCGTCGTTC TTCCTCGATA TCACGAAGCC GATTCTTCCG CCGCCGCCGC CGCCACCGAC GGAGGTGCCA CCGGATCCGA CGCCGACGCC AACGCCGACG CCCACGCCCA CGCCCACGCC CACGCCAACG CCAACGCCAA CGCCAACGCC AACGCCGACG CCAACGCCAA CGCCGACGCC GACGCCGACG CCGACGCCGA CGCCGACGCC GACGCCCACG CCCACGCCCA CGCCAACGCC AACGCCAACG CCAACGCCAA CGCCCACGCC GACGCCCACG CCCACGCCCA CGCCCACGCC GACGCCCACG CCGACGCCAA CGCCCACGCC AACGCCAACG CCAACGCCGA CGCCGACGCC AACGCCAACG CCGACGCCAA CGCCGACGCC CACGCCGACG CCAACACCAA CACCAACACC AACACCAACA CCAACTCCGA CTAGTTCCGA GATTTAA
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Protein sequence | MPNHFSNGRT NQSRTVVIRS GAMPRLLGQP ALEFLSLRGE EHLGKLYTYE LLLRTPDDFH VPLATSANLD LKAMIGTEMT VCIQLDGIGT GAQGGVGAGA REISGLVVKA GFLRCEGRYN VYRIELRPWL WLATLTSDYK IFQDKSVVEI IDTVLHDYPY PVEKRLDIDK YSVAGESARN EPRAFQVQYG ETDFDFVQRL MEEWGIYWFF EHSDNKHRLV LCDHIGGHRK APSEAYHEIA HHPEGGKIDI EYINYFSTDE ALRPGRVVID DFDFTRPLAS LVTSNHQPRE TNWGEGELFE WPGDYTDSKH GDLISRVRME ERRATGSRAY GRGNVRGLAC GHTFVLSKHK HDGANREYLV IESALMLTEV ADETGSGYRY ECDNELVVQP SNEVFRMPRE TPKPTTSGPQ SAIVVGPPGH EVWTDEFGRV KIRFLWDRYA RNDATDSCWV RVSQAWAGVN FGGIYIPRIG QEVIVGFMNG DPDRPLILGS LYNTITPPPW DLPGDATKSG FKSKSITGGR ENYNGIRFED KLGAEEFHMQ AEKDMNRLTK NDESHTVGAN FSIGVGLTHT RAVGAMFSSI VGGAASYAVG GAESTMIGGA YALNVGGAHA VAVGGASSVS VGGAYARNVG GAYALTVGGV LSIVCGASSI TMTACGSIKI VGKNIRIIGS DEVVVQGAPL QLNPGDSDCG GGGGGGGGGG AIPPIPLPSF FLDITKPILP PPPPPPTEVP PDPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTSSEI
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