| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1600 |
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| Symbol | |
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| ID | 3693446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 1950099 |
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| End bp | 1952840 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637731854 |
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| Product | outer membrane usher protein |
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| Protein accession | YP_336757 |
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| Protein GI | 76818889 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.68483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCG CTGGAGCAGT TGCATGCGGC GTTGGATCGT TGTGCATGCC GGTCGTCGCG
GCGGAATTCG ACGGCACGCG AACGGGCGAA CAATCGCGCC CGGATGCAAT GGGCGAGGCG
CCGTCTGGCG CAGAGCCGGG GACGCGTGGC CGGCAAGCCT TGCTGGTCGC GTCCCATGCA
TCCCCGTCAG CGCCGACGAC GGTCTCGTTC AATTCGCGCC TGCTCATGGG CGGCGGAATC
GATCTGTCGC GCTTCGAGCG AGGCAATCCC GTAGTGGCCG GCATTTACCC GGTCGACGTG
ACAGTCAACG GCGAACGACG CGGGCGGATG GACGTCGAGT TTCGCGACGT TCGCGGCGGC
GACAGTGCGG CGCCATGCTT TACGCGCGCG ATGCTGGATC GGCTCGGCGT GGAAGGCGAC
ATCGTCGCCA AGCGCCTCGA TGCCGCGCGC GACGCGACGG GCGCGGCATC GGGCCAGACG
CCGACGCTTT CCGCGAGCGC TTGCATCGGC TTGCGCGATG CGCTGCCTGA TGCGACGTAT
ACGCTCGACA GCGCCGACCT CACGCTCGAT CTGACGATCC CGCAGGTGGA CATGCGCAAG
ACCGCGCGCG GCTACGTGGA CCCGTCCCGA TGGGACAACG GCGTCAACGC CGGACTGCTG
CAGTACAACC TCAGCGGCTA CGCGAGCGAA AACAAGTTCT TCGGGAACCA TGCGAGCAGC
CTCTTTCTCG GTTTGCAAGC GGGCGCGAAT ATCGGGGCTT GGCGTGTTCG TCAACGTTCG
AACCTGATGT GGGCAAACCG CAGCGCCGGC ATGAGCTGGC GCAGCCTCGA AACCTACGTT
CAACGGGACA TCACGGCGTT GCGCAGCCAG ATCACGCTCG GCGACAGCTA CACGACCGGC
GAGATCTTCG AGTCGTTCGG TGTGCGTGGC ATGCAGCTGG CAAGCGATGA CCGGATGTTG
CCGGTTTCGC TGCAGTCCTA TGCGCCGACG GTTCGCGGCG TCGCGGATAC GAACGCGCGC
GTGGCCGTGC GCCAGCGCGG CAACGTGATT TACGAGGCCA GCGTTCCGCC CGGACCGTTC
GAATTCGACG ACTTGCCGCC GACCGGCTAC GGCGGCGATC TCGATGTGAC GATCACCGAA
TCGGACGGCA GAACGAAACA TTTCACGGTG CCTTTCGCAT CGGTGCGCCA ACTCCTGCGG
CCCGGCATGC AGCGCTTCAA CTTCACCGTC GGCCAGTATC GAGATGCGCT GTCGAACGGT
AAGCCATGGG TCGCGCAACT GACCTATCAG CGCGGCATGA CGAATTTGCT GACCGGCTAT
GCAGGTCTGC TGTCGTCGAC GGGTTACGCG TCCGGCTTGA TCGGCGTCGC GCTCAACACG
CCGATCGGCG CTTTCGCTTT CGATGTCACG TCCGCGCGCA CCCATTTGCC CGGACAAGGC
GCGCGTAACG GATTCAGCTC GCATCTGTCG TACAGCAAGA TGGTGCCGTC CACCGGAACC
CATTTCTCCA TGGCGGCGTA CCGATATTCG ACGGCGAATT ACTACAGTCT CGCCGACGCC
GTTACCGCGC GCTACGGCTA CAACGCGGAA GAGCGCGCAT GGCGAAACGA CTATCGGGCG
CGCACGCGAT TGCAGCTGAA CGTCAATCAG CGGATCGGAG ACCGGAGCTC CGCCTATGTT
TCGAGCAGTC TGCTGAGTTA TTGGGACGGG CGTGGACGGG ACATTCAGTT TCAGGCGGGA
TTTTCAAGCG TCTTCAAGCG CGTCTCGTAT ACGGTCTACG CCCAGCGCAG CCGCTCGAGC
GACGATCGCA CCGTTACGCA GGTTGGCGTG AATTTGTCGA TTCCGCTTGG CAGCGGCGCT
TATACGAAGA GAAATGCGTT CAGTTCGCTG ACGACTTCGC TGTCGCGCGC GTCCAACGGC
GACAGTTCGA TTCAGGCGAA TCTGTCGGGC AGCACGGCGC ACGTGGTGCC GATCGACTAC
GGCGTCAACG TGTCGCGCTC GGTTACCGGC GACAGCAATT TCGCATCGCT TGGGGTCTAT
GGCACTTATC GCTCGCCGTT CGGCACGTAC AGCGGCAACG CATCGGTCGA CAATCGGGCG
CGTCAGGCGT CGTTCGGCGC GAACGGGGCG GTGGTCCTGC ATCGCGGCGG CGTGACGTTG
AGCCCGCCGC TCGGATCTGC GGCGGCGCTC GTCGAGGCGA AAGGCGCGAG AGGCGGCAAG
CTGATCAACG GGCAGGGCGC GACGATCGAT CGCTTCGGCT ACGCGGTGAT TCCTTCGTTG
ATGCCGTATC GAGCCAACAC CGTCGCCATC GATCCGTCCG AGCTGCCGGA CGACGTCGAA
CTCGCGAATA CGAGCGAGGA GGTCGTGCCT CGCAACAATT CGATCGTCTT CGTGAAGATG
GAAACCAAGC GCGGAAGGCC GGTCTTCGCC GCGACCGAAA CCGAAGACGG CAAACCCCTG
CCGATGGGCA GCGAGCTGTT CGACGTCGAG GGCAAGTCGC TCGGCGGCGT GGGTCAAGGC
GGCATGGCGT TTCTGCGCGG TCTCCAGGGC GCCGGCAATG TGGTCGCGAA GTGGGGGGCG
GGTGCGTCCG AGCAATGCAC GATGCCCTAC CTGGTGCCGG CGGATCAGGC GCAAGCGAAG
CAATCACGGG CGATCGTTCG CATCCGCTTG CGTTGCGAGC CGCGATTGAG CGCCGACGCG
AGCCAGACGC CGGACGGCGA TGGCGGAACA CGGAATGATT GA
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| Protein sequence | MIAAGAVACG VGSLCMPVVA AEFDGTRTGE QSRPDAMGEA PSGAEPGTRG RQALLVASHA
SPSAPTTVSF NSRLLMGGGI DLSRFERGNP VVAGIYPVDV TVNGERRGRM DVEFRDVRGG
DSAAPCFTRA MLDRLGVEGD IVAKRLDAAR DATGAASGQT PTLSASACIG LRDALPDATY
TLDSADLTLD LTIPQVDMRK TARGYVDPSR WDNGVNAGLL QYNLSGYASE NKFFGNHASS
LFLGLQAGAN IGAWRVRQRS NLMWANRSAG MSWRSLETYV QRDITALRSQ ITLGDSYTTG
EIFESFGVRG MQLASDDRML PVSLQSYAPT VRGVADTNAR VAVRQRGNVI YEASVPPGPF
EFDDLPPTGY GGDLDVTITE SDGRTKHFTV PFASVRQLLR PGMQRFNFTV GQYRDALSNG
KPWVAQLTYQ RGMTNLLTGY AGLLSSTGYA SGLIGVALNT PIGAFAFDVT SARTHLPGQG
ARNGFSSHLS YSKMVPSTGT HFSMAAYRYS TANYYSLADA VTARYGYNAE ERAWRNDYRA
RTRLQLNVNQ RIGDRSSAYV SSSLLSYWDG RGRDIQFQAG FSSVFKRVSY TVYAQRSRSS
DDRTVTQVGV NLSIPLGSGA YTKRNAFSSL TTSLSRASNG DSSIQANLSG STAHVVPIDY
GVNVSRSVTG DSNFASLGVY GTYRSPFGTY SGNASVDNRA RQASFGANGA VVLHRGGVTL
SPPLGSAAAL VEAKGARGGK LINGQGATID RFGYAVIPSL MPYRANTVAI DPSELPDDVE
LANTSEEVVP RNNSIVFVKM ETKRGRPVFA ATETEDGKPL PMGSELFDVE GKSLGGVGQG
GMAFLRGLQG AGNVVAKWGA GASEQCTMPY LVPADQAQAK QSRAIVRIRL RCEPRLSADA
SQTPDGDGGT RND
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