Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1417 |
Symbol | |
ID | 3694570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1725446 |
End bp | 1727344 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637731671 |
Product | GMC oxidoreductase family protein |
Protein accession | YP_336574 |
Protein GI | 76818661 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGGCG CAACGCGCTC GACACTATGG GGTTCTCGTG AGCGGCCGCG GATCGCGGCG GCGCGCGCGC CGGGCGCCGT CGCGAGCCGG ATGCGCGAAG AGGCGCGGGA ATGCGCGGGA CCACGCGGCG CAGGCCGTGC GCCGCATCGC GCAACGGCGG CCGGCGGGAA AACAGGGAGA CGAACCGTTC GTGCACCGTC GCGCGCGCGG GCCGGTTCGA ACAATCAAAA GGTGAACCGA ATGAAGCAGC AGTCCTACGA TTACGACTAC GTCGTGGTCG GCTCCGGCTT CGGCGGCAGC GTCTCGGCGC TGCGTCTGTC CGAGAAAGGC TATCGTGTGC TCGTGATCGA GCAGGGCCGT CGCTGGACGC CCGAGAACCT GCCGGAAAGC ACGTGGAACC TGTCGCGCTG GCAATGGCGC CCCGCGCTCG GGCTGCGCGG CTTCTTCAGC ATGCGCTTTT TCAGGCACGT CGTCGTGCTG CACGGCAATG CGGTGGGCGG CGGCTCGATC ACGTACGCGA ACACGCTGCT CGTGCCGCCC GACAAGGTCT GGCGCGAGGG CACATGGGCC GGCCTCGAGG ACTGGGAGCG CGTGATGCCC GCGCACTACG CCACCGCGAA GCGCATGCTC GGCGTCGTCA CGAACCGGCG AATGGATGCG GCCGACTTCC GGCTGAAGGA CATGGCGAAG CTGATCGGCG TCGAGAAGAG TTTCTATCCG ACCGAGGTCG GCGTGTTCTT CGGCGACGAC GCCGACGCGC CCGGCACGCG CTACGCCGAT CCGTACTTCG GCGGCGCGGG CCCGGAGCGC ACGTCGTGCA TCGGCTGCGG CGGCTGCATG GTCGGCTGCC GCCACGGCGC GAAGAACACG CTCGACCGCA ATTACCTGTA TCTCGCCGAG CGCCTCGGCG CGCAGGTGCG CGAGCAGACG AAGGTCGTCG ACGTGCGCCC GCTCGACGCG CGCGCCGACG GCGCGGCGGG CTACGCGGTC GAAGCGGTGT CGCTCGCGGC GGGCGCGCGC GGCGCGAAAA GCCGCCTCAC GTGCCGCGGC GTCGTGTTCG CCGCATCCTC GCTCGGCACG CAGGATCTGC TGATGCGCCT GAAGGAAAAG GGCTCGCTGC CCCGGCTGTC GGACGCGCTC GGCAAGCGCG TGCGCACGAA CGCCGAATCG CTGATCGGCG TGCGCTTTCC GAAATCGCGC GTCGATCTGT CGAAGGGCGT GGCGATCGGC TCGGGCATCT ACATCGACGA GCACACGCAC ATCGAGGCCA CCCGCTATCC TTCGGGCTCC GACACGATGG GGCTGCTCAC GACCGTGCTC ACGCGCGGCG CGCCGGGCGG CCTGCGTGTG CTCGTGTGGC TCGGCGCGCT CGCGAAGCTC GTTCTCACGC GACCGCTGAG CGCGTGGCGG ATGATCGACC CGCGCGGCTT CGCGCGCGAG ACGATGATCT TCCTCTGCAT GCAGACGCTC GAAGGACACC TGACGATGCG CCTGAAGCGC CGCTGGTTCT GGCCGTTCTC GAAGCAGCTC GCGACCTCCG GCGCGAAGAT CCCCGCCTAC ATTCCGGCCG CGAACGACTT CGCGCAGAAG GCCGCGCGCG CGCTCGGCGG CGTGCCGATG ACCTCGCTCA CCGAGATCCT GCTGAACGTG CCGATGACCG CGCATTGCAT GGGCGGCGCG GCGATGGCGC GCGACGCGCG CGACGGCGTG TGCGACGGCC GCAGCCGCGT GTTCGGCTAT CGGAACATGT ACGTCTGCGA CGGCTCGGTG CTCGGCGCGA ACCTCGGCGT CAACCCGAGC CTCACGATCA CGGCGCTCGC CGAGCATGCG ATGAGCCACG TGCCCGCCGC GCGCGAGCAG CGGTGGGACA GTACCGCGGA GACGCCTGTC GCGGCATGA
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Protein sequence | MLGATRSTLW GSRERPRIAA ARAPGAVASR MREEARECAG PRGAGRAPHR ATAAGGKTGR RTVRAPSRAR AGSNNQKVNR MKQQSYDYDY VVVGSGFGGS VSALRLSEKG YRVLVIEQGR RWTPENLPES TWNLSRWQWR PALGLRGFFS MRFFRHVVVL HGNAVGGGSI TYANTLLVPP DKVWREGTWA GLEDWERVMP AHYATAKRML GVVTNRRMDA ADFRLKDMAK LIGVEKSFYP TEVGVFFGDD ADAPGTRYAD PYFGGAGPER TSCIGCGGCM VGCRHGAKNT LDRNYLYLAE RLGAQVREQT KVVDVRPLDA RADGAAGYAV EAVSLAAGAR GAKSRLTCRG VVFAASSLGT QDLLMRLKEK GSLPRLSDAL GKRVRTNAES LIGVRFPKSR VDLSKGVAIG SGIYIDEHTH IEATRYPSGS DTMGLLTTVL TRGAPGGLRV LVWLGALAKL VLTRPLSAWR MIDPRGFARE TMIFLCMQTL EGHLTMRLKR RWFWPFSKQL ATSGAKIPAY IPAANDFAQK AARALGGVPM TSLTEILLNV PMTAHCMGGA AMARDARDGV CDGRSRVFGY RNMYVCDGSV LGANLGVNPS LTITALAEHA MSHVPAAREQ RWDSTAETPV AA
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