Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1198 |
Symbol | |
ID | 3692284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 1505236 |
End bp | 1505727 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637731452 |
Product | hypothetical protein |
Protein accession | YP_336355 |
Protein GI | 76819304 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCGTCG CAATGTTTAT GAAAGTGGAC GGCGTCACCG GCGAATCGGC CGACGCGCAG CACAAGGGCT GGACCGACAT CCAGTCGTTC TCATGGGGCG CGAGCCAGCC GGGCGCGATG GCGAGCGGCA GCGGCGGCAA CGCGGGCAAG GCGAGCTTCA ACGATCTCGT CGTCGCCGCG TACATGGACA AGGGCGCAAC GGCGATCATC AAGAACTGCG CGAGCGGCAA GCACCTGCCG ACGGTCGAGA TATCGGCGTG CAAGACGGGC GGCTCGCAGA TCGAGTTCAT GCGCGTGACG CTGCAGGAAG TGCTCGTCAC GTCCGCGCAG ATCGCGGGCG TGGACCCGGG CGACGCGGCC GACCGGCTGA TGATGCAGTA CGGTTTTCAG GCCGCGAAGG TCAAGAAGCA GTACTGGCAG CAGAACGACA ACGGCGGCAA GGGCGCCGAA GTGTCGGTCG GCTGGAACAT CAAGGAGAAC ACCGAGATGT GA
|
Protein sequence | MGVAMFMKVD GVTGESADAQ HKGWTDIQSF SWGASQPGAM ASGSGGNAGK ASFNDLVVAA YMDKGATAII KNCASGKHLP TVEISACKTG GSQIEFMRVT LQEVLVTSAQ IAGVDPGDAA DRLMMQYGFQ AAKVKKQYWQ QNDNGGKGAE VSVGWNIKEN TEM
|
| |