| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1195 |
|---|
| Symbol | |
|---|
| ID | 3694361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 1501306 |
|---|
| End bp | 1502784 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637731449 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_336352 |
|---|
| Protein GI | 76817888 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA ACCCGAAACC GGAGCCCGCC GGCGTGGACG CGGGCTCGCA CGCGAACTCG
AATGCGGGCC GGCGCGCCGG TGCGGCCGCG AATGTGGAGG CGAACGCGGA GCCGGACGCG
ATGCCGAATG CGCTCCGGGG CGCGGCTGCG GATGTCGCGC CAAGCGCGGC GCCGAGCGCG
ACGCCAAATG CAACGCCGAG CGCGACGTCG CAGGCCGCCG CCGCGCGCCG CGACGCATGG
TGGCGCCGCC TGCGCGCCGC GCCGCACGGC TACGACCTGT TTCATGCGCT GCGTTGGCTC
GATGCGCTGT CGCCCGAGCA CGCGCCGTCC GGCTACGCGT CGCGGCCGCG CGACGAGCCG
GTGCGCTTCG GCCAGGCGCC GTCGCTCGCG TTCGCGGCCG CGATGCTCGC CGACGTGCGT
GACGACGGCC CGCGCCCGCG CGTCGCGATT CACGGCTTCG GGCTGTTCGG GCCGAACGGG
CCGCTGCCGT CGCATCTGAC CGAGTACGCA TACGAGCGCG CGACGCAGCA TGACGATCCG
ACCTTCGCCG CGTTCGCCGA CCTGTTTCAT CATCGGCTGA TCCTGCTGTT CTATCGCGCA
TGGGCCGATG CGCAGCCGAC CGTCAGCCTC GATCGGCCGG CGCGCGCGCG GTTCGACCGC
TACGTGGCCA GCCTGATCGG GCCGTGCGAC GCGTTGCTTG CCGATTCACC GCGCGGCTCA
CGGCCCGATT CGTCCTTCGC TTCGTCGTCC GATTCACTGC CTGATTCACC GCCTGATTCA
TCGCCTGATT CGCGGTCTGA TTCGCGGTCC GATTCCCCGT CCGATGCGCA CCTCGATCCG
CATCCCGACT CGCCGCGCGG CGCTGGCGCG CTCGCGCCGC ACGCGAAGTA TCACCAGGCC
GGCCATCTGG TGCGGCACAC GCGCAACCCG GAGGGGCTCG TGCAGATCCT GCGGCGCTAT
TTCGGTGTGC GGGTACGCAT CGTCGAGCAC GTGCCGCACT GGGTGATGCT CGATCGCGCG
CAGCGCTGCG CGATCCGCGC GACGCGGCCG ACGCAGCCGC TCGGCGGCGC CGTGCTCGGC
CGTGCGGTGC GCGACGCGCA GTCGCGCTTC CGGATCGTGC TCGGCCCGCT GACGCTCGAC
GAATACCGGC GGTTCCTGCC GGGCGGCGTC CATGCGCGGC AGCTCGCGCA ATGGGTGCGC
GAATACGTCG GCATCGAATT CGACTGGGAC GTGCAGCTCG AGCTCGCGCG CGGCGAAGTG
CCGACGCTCG CGCTCGGCAG CCGTCACGGG CTCGGCCGCA CCGCATGGCT CGGCGAGCGG
CTCGACCCCG GCCCCGCGCG CGACCTCGTG CTCGGCTACG ACGAGCGCAT GCGCGCTTCG
CGCGCCCGAT CGGGCGCGGC CGATCAGGCG GCCGCCGCCG GTGCATTGAT CGCCAACCTG
CCTGAACGGG AAGCGCCATG TCCGATATCG GCCGAGTGA
|
|---|
| Protein sequence | MTTNPKPEPA GVDAGSHANS NAGRRAGAAA NVEANAEPDA MPNALRGAAA DVAPSAAPSA
TPNATPSATS QAAAARRDAW WRRLRAAPHG YDLFHALRWL DALSPEHAPS GYASRPRDEP
VRFGQAPSLA FAAAMLADVR DDGPRPRVAI HGFGLFGPNG PLPSHLTEYA YERATQHDDP
TFAAFADLFH HRLILLFYRA WADAQPTVSL DRPARARFDR YVASLIGPCD ALLADSPRGS
RPDSSFASSS DSLPDSPPDS SPDSRSDSRS DSPSDAHLDP HPDSPRGAGA LAPHAKYHQA
GHLVRHTRNP EGLVQILRRY FGVRVRIVEH VPHWVMLDRA QRCAIRATRP TQPLGGAVLG
RAVRDAQSRF RIVLGPLTLD EYRRFLPGGV HARQLAQWVR EYVGIEFDWD VQLELARGEV
PTLALGSRHG LGRTAWLGER LDPGPARDLV LGYDERMRAS RARSGAADQA AAAGALIANL
PEREAPCPIS AE
|
|---|
| |